Gene Shel_26040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26040 
Symbol 
ID8396492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2872996 
End bp2873754 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID644987347 
Producthypothetical protein 
Protein accessionYP_003144958 
Protein GI257065286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.419278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG GTTACGGACT TCACACGATC ATATGGGATT CGGCGGACGA GCGGCTGGGT 
GACCTCCTGG TGGCGTCGCC CGCCGACGCC ACGGGGCGCG GCCTTGAGCT GCACGTTCGA
CAGGGCGGCG CGGCTGCCGA CCTGACCGGC GCCGAGGTCT ACTTCCTCTG GAGGCACAAG
ATGGCCGGCA CGCGCGGGTG CGAGCCGATG ACGGAGATTG ACGCGTCCCT GGGGCAATTC
GTCGTATACT ACCCGGCCGC CATGCAGGAG GCCGAGGGCG CGGTGGACGC GCAGTTCATG
GTGACGCATG ACGGCAAGAG CATCAGCACG CGGGCGTTCA CCATCCGAGT GGAGCCCGTG
ATCACAGGCG GCACCGAGAG CGAGGACGGC TTCACCCTGT TCGTGGAGAC CATCAAGCGC
TACGAGGGCG CAATCGAGAT CACCACGGCG GCGGCTGACG CGGCCAACGA GGCGGCTGAG
GCGGCAAACG ACGCTGCCGA TTCCGCCACT GCTAGCTGGA GCGGCTCGGT GCTGACGGTG
ACGAGCGCGT CGGGCACGAG CTCGGCCGAC CTGCGCGGGC CACAGGGCAT CCAGGGAATC
CAAGGCGAGA CTGGCCCGCA AGGCGAGACG GGAGCCACGG GGCCGCAGGG TTCGCAGGGG
CCGTCGGGCA CGACGCCCGA CCTATCGGCC TACGCCACCA AGCAGTACGT GGACGACGCC
ATCGCCGCGC TCGTCAACCT CGAAGAGGAA GAGTTTTAG
 
Protein sequence
MLDGYGLHTI IWDSADERLG DLLVASPADA TGRGLELHVR QGGAAADLTG AEVYFLWRHK 
MAGTRGCEPM TEIDASLGQF VVYYPAAMQE AEGAVDAQFM VTHDGKSIST RAFTIRVEPV
ITGGTESEDG FTLFVETIKR YEGAIEITTA AADAANEAAE AANDAADSAT ASWSGSVLTV
TSASGTSSAD LRGPQGIQGI QGETGPQGET GATGPQGSQG PSGTTPDLSA YATKQYVDDA
IAALVNLEEE EF