| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25870 |
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| Symbol | |
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| ID | 8396475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2859605 |
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| End bp | 2860369 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644987330 |
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| Product | D-Ala-D-Ala dipeptidase vanX |
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| Protein accession | YP_003144941 |
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| Protein GI | 257065269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGC GCAATGCGAT CAAGCTGAGC GGGCTTGCCT TGGCTGGGGC GGCTGCCGCA
TCGCTTGCAG GCGGTTGTGC ACAAAAGCCG GAAGAAACCG ACCTGTACGA GGGCTACACG
AAGTTGGATG ACGCGTCCTA CGACGCGAGC GATTTCGTGC TGATTACCGA TGTGGCGCCC
GACGTCATCC AAGAGATTCG CTACTTCGGC ACGTACAACT TCGTGGGCGA ACACATCGAC
GGCTACTTGG AACCCGTGGC AATCCTGTGC AAGCAGGCGG CCGAAGCCTT AAAGGATGCA
AGCGACGCCG CCATCGCCGC AGGCTATCGC CTGAAGATTT GGGATGCGTA TCGACCGCAG
CGCAGCGTGA ACCACTTCGA GCGCTGGGCG GAGGATGTGA ATGACACGCG CATGAAGCCC
TATTTCTATC CTGACCTGGA TAAATCCGTG CTGTTCGACC AGGGCTACAT CGACCATCGC
AGCGGACACA GCCGCGGTGC GACGGTGGAC CTTACGCTGT TCGATATGGC GACGGGTAAG
GAAATCGACA CCGGCGGTCC CTTCGATTTC TTCGGCGAGC TGAGCCATCC CGATTACATG
GATATCACCG ACGAACAGTA CGCCAACCGC ATGACCCTGC GCGACATCAT GGTAGGCGCC
GGCTACACTC CGCTCGATAC CGAGTGGTGG CATTTCCGCC TGGCCGACGA GCCGTATCCG
GAGACGTTCT TCGACTTTCC GAACTGCGCC GACGCCGTAA AGTAA
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| Protein sequence | MSRRNAIKLS GLALAGAAAA SLAGGCAQKP EETDLYEGYT KLDDASYDAS DFVLITDVAP
DVIQEIRYFG TYNFVGEHID GYLEPVAILC KQAAEALKDA SDAAIAAGYR LKIWDAYRPQ
RSVNHFERWA EDVNDTRMKP YFYPDLDKSV LFDQGYIDHR SGHSRGATVD LTLFDMATGK
EIDTGGPFDF FGELSHPDYM DITDEQYANR MTLRDIMVGA GYTPLDTEWW HFRLADEPYP
ETFFDFPNCA DAVK
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