Gene Shel_25490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25490 
Symbol 
ID8396437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2821786 
End bp2822820 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content62% 
IMG OID644987294 
Productprotein of unknown function (DUF1858) 
Protein accessionYP_003144905 
Protein GI257065233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA ACGAGAACAC CCGACTTGAA GACCTGATTA AAGAGTATCC GGCGCTGCGG 
ACGGGCATGG CAGACATCAA CCCCAGGTTC AAAATGCTGC AGACCCCAAT GGGCAAGATC
ATGATCAAGA AGGCGACCGT GGCGGATATG AGCGAACGCT CCGGCATGCC GGTCGACGAG
CTGGTTGCTG CGATTGCGGC GAAAACCGGC CTCGGGGCTG CCGATGGATC TGCGAGCTTG
ACGCCGGCCG CCGAACCCTT GCCGACCGCT CGCGCTGCAA CACCGGCGGT CGAACAGCAA
GACGAGCTTG GCGAGCCGCT GTCGGAACGC CCCGCCGAAA TGGATGCCGA GCCCCAGGTC
GAACGGTGGG GTAAGGTCGA CGGCTTCAAG GTGATAGACG TGCGCAAGGC CCACGGGAAC
TTCTTCCCGG GCTTGAAGAA GCGCGCCGAG GAGACGGCCG TGGGCGAAGG GCTTCACATC
GTGCAGTCCT TCGAGCCCAT TCCTCTGTAT GACGTCATGG CCGAGCTCGG TTACGAGCAC
GTGGTCCGTC GCGGCGATGC AGGCGAGTAC CACGTGTACT TCTACCGCGC CGAGCAGGGC
GAAGACTCCG GGGAAATCGC CTTCCGCCCC ATCGCGCTGC TGAACTTCCC GGTCATCGAC
GAGGAGCTCG GCGACGTTGC GGTCAACTTC TGGAACCTGA CCTGGAACGA CGATAAGCGC
TATCTGTCCC AGGAGACGCG TCTGCTGCTG TCGATGGCGA ACGCCCTGGG CGCAGGCCGC
ATGCGCCAGG CAAGCCGCGA GCTCATCAAG GCTTACGCGC ACGGCTGCGA CTCGCGGGCC
TTCGACGACG TGTTCGAACT GGTCGCATGG AACCAGGGCA TCGGCAATTT CGCCTCGGAA
ATTGGACCCA GCACGTTATT CCGCGCATAT CGCACTATTA AAGACCAAGA GAAACGCGGT
GTGCCGCGCG CCGAGATCGT CGAGATGCTG AAGGAACGGT TCGGCGAGCA GAACCCGGAT
GTGGGCGTGC AGTAA
 
Protein sequence
MELNENTRLE DLIKEYPALR TGMADINPRF KMLQTPMGKI MIKKATVADM SERSGMPVDE 
LVAAIAAKTG LGAADGSASL TPAAEPLPTA RAATPAVEQQ DELGEPLSER PAEMDAEPQV
ERWGKVDGFK VIDVRKAHGN FFPGLKKRAE ETAVGEGLHI VQSFEPIPLY DVMAELGYEH
VVRRGDAGEY HVYFYRAEQG EDSGEIAFRP IALLNFPVID EELGDVAVNF WNLTWNDDKR
YLSQETRLLL SMANALGAGR MRQASRELIK AYAHGCDSRA FDDVFELVAW NQGIGNFASE
IGPSTLFRAY RTIKDQEKRG VPRAEIVEML KERFGEQNPD VGVQ