Gene Shel_25080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25080 
Symbol 
ID8396396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2775617 
End bp2776009 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID644987253 
ProductFe2+/Zn2+ uptake regulation protein 
Protein accessionYP_003144864 
Protein GI257065192 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0884067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA GAAGGAATAC GCATCAGCGC GAGCTGGTTA AGGAAGCTGT CGGTGCCCTT 
GGCGTGCATC CTACGGCTGC GCAGGTTTAC GAATACGTCC ATTGCCGCGA CAAAAAGGTG
AGCCTGGCGA CGGTGTATCG TAATCTTAAT CTGCTTGCCG AGGAGGGCGA CATTCTGGCT
ATCGAGACAT CGGCCGGCCG CCATTACGAC TACCGCACCG ACGACCATGA GCATATGGTC
TGCGTGCAAT GCGGCGCCAT GATGGACGTT ACTGTGCCGT ATGACGCATC CTTAGACCAG
GCGGCAAGCG AGGCAACCGG GTTTGCGGCG GTGCGCCATC GGATTTTTTT CGAAGGGGTG
TGTCCTGATT GCGCCCGATC AGCCGAGGGC TGA
 
Protein sequence
MAQRRNTHQR ELVKEAVGAL GVHPTAAQVY EYVHCRDKKV SLATVYRNLN LLAEEGDILA 
IETSAGRHYD YRTDDHEHMV CVQCGAMMDV TVPYDASLDQ AASEATGFAA VRHRIFFEGV
CPDCARSAEG