Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24800 |
Symbol | |
ID | 8396368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2746331 |
End bp | 2747008 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987226 |
Product | transcriptional regulator |
Protein accession | YP_003144837 |
Protein GI | 257065165 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGA TCCGGGCGTT CGTGCAAAGC GGCAGGAACA TCGCCGAGCA TGCGGCAACC ATAAAAGGCC TGGTCGAAGG GAACATAGCC ATCGGCACGT ACTTCAGCAT CGCCGCCCAG TGGCTGCCGT CGGTCATCCG CGCGTTCCAG GACGACCACC CCGGCGTGTC CATTTCCATG GTCGAAGCCG GCAACGCCGA GCTTGCGCAC CTGATGGCCG AGTCGCGCAT CGACTGCTGC TTCACGAACC GACGCCTGGC AACCGGCGAC TGGGTGCCGC TGGCCAGCGG CAGCATCGTG GCCTGGATTC CCACCGACTG GCCCGAAGCG GAGCTGGACG CCTTCCCTCT GGATCAAATG GAGAATAAGC CCTTCATCAT GCCGCTGCCC GGCAACAAGA ACGACGTCGA AACGTTGATT GCCGAACATC GCATCCACGT TGACGAAAGG TTCACCGCCA ACGACGGGTA CACCGCATGG CGCATGATGG AACAGGGGCT CGGCATGAGC CTGAACAATT CTCTGATGGG ATGCACGTGG CAAGGCGACG TCCGCGTCAT GTCGCTGGAC CCGCCCCAGG AAATCGAGCT GGGCGTATCC GTTCCCTATC TGCAGGCGGC CTCGCCCGCA ACCCGGGCGT TCATCGAGTA CGCCACCCGC ATCGTGCCCA CGCTGTAG
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Protein sequence | MPLIRAFVQS GRNIAEHAAT IKGLVEGNIA IGTYFSIAAQ WLPSVIRAFQ DDHPGVSISM VEAGNAELAH LMAESRIDCC FTNRRLATGD WVPLASGSIV AWIPTDWPEA ELDAFPLDQM ENKPFIMPLP GNKNDVETLI AEHRIHVDER FTANDGYTAW RMMEQGLGMS LNNSLMGCTW QGDVRVMSLD PPQEIELGVS VPYLQAASPA TRAFIEYATR IVPTL
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