Gene Shel_24800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24800 
Symbol 
ID8396368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2746331 
End bp2747008 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID644987226 
Producttranscriptional regulator 
Protein accessionYP_003144837 
Protein GI257065165 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGA TCCGGGCGTT CGTGCAAAGC GGCAGGAACA TCGCCGAGCA TGCGGCAACC 
ATAAAAGGCC TGGTCGAAGG GAACATAGCC ATCGGCACGT ACTTCAGCAT CGCCGCCCAG
TGGCTGCCGT CGGTCATCCG CGCGTTCCAG GACGACCACC CCGGCGTGTC CATTTCCATG
GTCGAAGCCG GCAACGCCGA GCTTGCGCAC CTGATGGCCG AGTCGCGCAT CGACTGCTGC
TTCACGAACC GACGCCTGGC AACCGGCGAC TGGGTGCCGC TGGCCAGCGG CAGCATCGTG
GCCTGGATTC CCACCGACTG GCCCGAAGCG GAGCTGGACG CCTTCCCTCT GGATCAAATG
GAGAATAAGC CCTTCATCAT GCCGCTGCCC GGCAACAAGA ACGACGTCGA AACGTTGATT
GCCGAACATC GCATCCACGT TGACGAAAGG TTCACCGCCA ACGACGGGTA CACCGCATGG
CGCATGATGG AACAGGGGCT CGGCATGAGC CTGAACAATT CTCTGATGGG ATGCACGTGG
CAAGGCGACG TCCGCGTCAT GTCGCTGGAC CCGCCCCAGG AAATCGAGCT GGGCGTATCC
GTTCCCTATC TGCAGGCGGC CTCGCCCGCA ACCCGGGCGT TCATCGAGTA CGCCACCCGC
ATCGTGCCCA CGCTGTAG
 
Protein sequence
MPLIRAFVQS GRNIAEHAAT IKGLVEGNIA IGTYFSIAAQ WLPSVIRAFQ DDHPGVSISM 
VEAGNAELAH LMAESRIDCC FTNRRLATGD WVPLASGSIV AWIPTDWPEA ELDAFPLDQM
ENKPFIMPLP GNKNDVETLI AEHRIHVDER FTANDGYTAW RMMEQGLGMS LNNSLMGCTW
QGDVRVMSLD PPQEIELGVS VPYLQAASPA TRAFIEYATR IVPTL