Gene Shel_24080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24080 
Symbol 
ID8396296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2665925 
End bp2666725 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID644987154 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003144765 
Protein GI257065093 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CATTGCTCGG TAAATACTAC GCCGCCGACA GCGCGGTGCA CAACCTGGAC 
GCACGCATCA AGATCACGGC GATGCTCGCC ATGATGGGAG CCATCTTCGC ATGCGGCAGC
TACGCCGCCC TTGGAGTATG CGCCCTGTTC ATAGCGGCGG CCTTCGCACT CTCGCACGTG
CCGGCGGGCC AAGCCCTGCA TTCCATCGCG CCGCTCATGT TCATCGTAGT CATCACGGCC
ATCATCAACA TCTTCTTCGA GCATGACGGC GCCGTGCTGC TGCAGCTCGG ACCTATTGTC
ATCAACCAGG GCGGCGTGCA CCTGGCCGTG TTCATGGGCA TCCGACTCAC CCTGCTGCTG
CTTGTCGCCA GCCTGCTGAC ACTGACGACC ACCACCATCG ATTTGACCGA CGGCATGGAG
GCCCTGCTCA AGCCCTTTGC GAAAATCGGG TTTCCCGCCC ATGAGTTCGC CATGATCCTC
GGTATCGCCC TGCGGTTCCT TCCCCAGTTC ATGACGGAAT TGAATGTCAT CCGCGCCGCT
CAGGCATCCC GCGGCGCACA TTTTTCAGCC AACGTGTTCA AGGACGGCCT CAAGGGCATA
TCGAGTCTGA TGGTACCTCT GTTCACGAGC GCGTTCCGTC ATGCCGAAAC CCTTTCCGGC
GCCATGGAGG CGCGCTGCTA CCACGGTGGG ACGGGCCGCA CAAAGCTCAA TCCCTTCAAG
CTGCGCGCGG CAGACGGCTT GGCCATGCTT CTGGTCTGCG CTTGCATCGC CTGCGTAGTG
GCGCTCAATA TCCTTCTGTA A
 
Protein sequence
MNDALLGKYY AADSAVHNLD ARIKITAMLA MMGAIFACGS YAALGVCALF IAAAFALSHV 
PAGQALHSIA PLMFIVVITA IINIFFEHDG AVLLQLGPIV INQGGVHLAV FMGIRLTLLL
LVASLLTLTT TTIDLTDGME ALLKPFAKIG FPAHEFAMIL GIALRFLPQF MTELNVIRAA
QASRGAHFSA NVFKDGLKGI SSLMVPLFTS AFRHAETLSG AMEARCYHGG TGRTKLNPFK
LRAADGLAML LVCACIACVV ALNILL