Gene Shel_23780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23780 
Symbol 
ID8396267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2634181 
End bp2635365 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID644987125 
Producthypothetical protein 
Protein accessionYP_003144736 
Protein GI257065064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGA TTCTCGACTA TCTTGATTGG CGCGGCGACC TGTCGTTCAC GACCAGCCCC 
TTCAACGAGG TGGACAACCT GATCCTGTCC GAGCTCGTCT ACCTCGAGCT TGACGGCATC
GTCGGCGGGC TGGAATCGGA CGACTTCCCC ACCTTGGCCC AAACCCAGAA GGAACTCGAG
CGCCGCGGCG TCAAGCCGTC GTCGCCGATC AACAACCCGC ACATCCTGGC GAGCAAGGCC
GCCGAAACCG ACCGGTACCG CGACGTGCGG CTGGCCTGGT ACCAGTCGAA CGTCGATGCC
GCGCGCCAGG TCCAATACGG CGCCGTCACC TTCTTCCTTC CGGACGGCAC CGTCTACGTG
GCGTTCCGTG GAACGGACAG CACCATTGTC GGCTGGCGTG AGGACTTCAA CCTGTGGTAT
TCCGACTCCA CCCCAGGTCA GGACCACGCT CTCGCCTACC TGGATGCCGT TGCCGGCAAA
ACCCAGGGCG ACTTGACGGT GGGCGGCCAC TCCAAAGGCG GCAACCTGGC CATATACGCC
GCAGCCTTCG GCCCCTACCG GGTGCGCGAA CGCGTCCGCG TCGTCTACTC CAACGACGGG
CCCGGGTTCA ACAAGAAGAT CATCGCCACA CCCCAGTACC ACGCGGTGCT GCCGAAGGTG
CGCCACATCA TTCCCGAATC GTCGCTCATC GGCATCCTCA TGGCGAACAC CCCGATAAAG
ACCATCGTCA AAAGCACGGC GTCCGGCGTC CAGCAGCACG ACCCGTACAC CTGGGCTGTG
CTGGGAACCT CTTTCGAACT GGCCGACGAA CTGTCTAGCA TAAGCCTGTT CGCCAACGAC
ACCTTCAACC GTTGGTTCAC CACCATGGAT GAGGACAGCC GACGCACCGT GGTGAACGCG
GTGTTCGATT CGTGGGAGGC ATCCGGCGCG ACCACCGTGT CGGAGTTCAG AAGCATGAAC
CCTTCTGCAT ATGCGGCCAT CCTGAAAAAC GTTGCGGACC TGGACGCGGA CACCAAACGC
GAGGTGATGG ACTCCGTAGG CAAGCTTTTC GAAGCCGGCG CCAGGACGTT TGCCGAGGGA
GCGAAAAACC GCACCAAGGC AGCGCTGGAG CAGCATGTGG CCTCGCGCAT CCAGACGAGC
CGCGTGCAAA TGCCCGCGCT TGAGCACCAG CGCCCGCAAT CCTGA
 
Protein sequence
MQTILDYLDW RGDLSFTTSP FNEVDNLILS ELVYLELDGI VGGLESDDFP TLAQTQKELE 
RRGVKPSSPI NNPHILASKA AETDRYRDVR LAWYQSNVDA ARQVQYGAVT FFLPDGTVYV
AFRGTDSTIV GWREDFNLWY SDSTPGQDHA LAYLDAVAGK TQGDLTVGGH SKGGNLAIYA
AAFGPYRVRE RVRVVYSNDG PGFNKKIIAT PQYHAVLPKV RHIIPESSLI GILMANTPIK
TIVKSTASGV QQHDPYTWAV LGTSFELADE LSSISLFAND TFNRWFTTMD EDSRRTVVNA
VFDSWEASGA TTVSEFRSMN PSAYAAILKN VADLDADTKR EVMDSVGKLF EAGARTFAEG
AKNRTKAALE QHVASRIQTS RVQMPALEHQ RPQS