Gene Shel_23760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23760 
Symbol 
ID8396265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2632297 
End bp2632980 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID644987123 
ProductHIRAN domain-containing protein 
Protein accessionYP_003144734 
Protein GI257065062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGCG GACCGTTCGA TTTCAACGAC AATGGGCGCA TGGACCCCTT CGAAGCGTCC 
GTCGGCCACC ACGTGATATT CGACGTGTTC GGAACAGAGG GCGGTTCGGA CGACGATGCT
TGGACGACTT CCTCACGGAC GAAGCCGAAG GCGTCGTCGC AGCGCAAGTC CGCGTTGGAT
GCGTGGCTGA ATTCATCTGA CGACGATGGT TTCAACCGGG CCACGGATTC TTGGAACGAT
GTACTTGAAA GCGAGTATCC CTGGACCAGC GAGCCGTCGG CAGCAAGCAG CTGGTGTGAC
ACCATCGATG ACGAAGACGG CGATAGCGAA GACCCTTGGG CCGCGGACAA TGACGAAGAC
GAGGATCTGT ATTTCCATAC GTATGTGGCC GGCACGAAGT TCGACAACCA CGACGTGGCC
TGGTCGCATG CCGAATTCAC CTACGGACTC GAAATCGACC TGGTCAGGGA GCCGAATAAC
GAATACGACC CGAACGCCAT AGCCGTATAC GCCGACGGGC TGCATGGCGG ATATGTACCG
GCCGATGTGG CGTCTACGCT GGCCGACTTG ATGGACAGCG GATGGGAGGC AACGGCGAGC
AACGTCCGCA TCTCCGTCGA CGACGACCGC GAGGGCCCGT ACCGCGTTCG GCTGGACATT
CGCGCTCACA ACCCGTGCGC TTAG
 
Protein sequence
MYGGPFDFND NGRMDPFEAS VGHHVIFDVF GTEGGSDDDA WTTSSRTKPK ASSQRKSALD 
AWLNSSDDDG FNRATDSWND VLESEYPWTS EPSAASSWCD TIDDEDGDSE DPWAADNDED
EDLYFHTYVA GTKFDNHDVA WSHAEFTYGL EIDLVREPNN EYDPNAIAVY ADGLHGGYVP
ADVASTLADL MDSGWEATAS NVRISVDDDR EGPYRVRLDI RAHNPCA