| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23570 |
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| Symbol | |
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| ID | 8396246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2611088 |
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| End bp | 2612158 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987104 |
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| Product | predicted membrane-associated Zn-dependent protease |
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| Protein accession | YP_003144715 |
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| Protein GI | 257065043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.127654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0171922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTG CCCTTGAAAT ACTGTATCTG ATCCTGGTGC TGAGCATCCT CGTGTTCATT
CACGAGGGCG GCCACTTTCT GGCTGCCCGC ATGTTCGGTG TCAGGGTGAC CGAGTTCATG
CTGGGCCTGC CCGGCCCGAA AATCGGCTTC ACCAAAGGCG ACACGATGTT CGGCGTGACT
GCGGTGCCGC TGGGCGGCTA TGCCAAAATC TGCGGTATGG AGCCCGGCGC CGAGAACCCT
TATATAGAGA AGGCCCTGGC CTTCGCCTAT GAGCGTGGCA CGTTCTACGC CGACGACTTC
GCATTCCAGG AGGGCATCTC CATCGACGAC GCCGTAGAGG TGTTCTACAT CCTGGAGGAG
TGGGGCTGCC TGGTTGGCCC CAAGAAGACC GACGAGCACA ACGTTTTCTA CACCCGCGCG
CGGCGCATCA AGCGCAAGGG CATCGATCTT AAGGAAGGCG AGCCCCGGCC CTTTGACGAC
GCCCACGAGC TCTACCTGGA GGAACGCTCC CACACCTACC GCTCGCTGCC GTTCTGGAAG
CGTTCGGTCA TCCTGCTGGC AGGCATCTTC ATGAACCTGC TCTTCGTCGT TGTGGTGTTC
GTCGTCGTGT TCTCCATCTT GGGCATGGAC TACACGTTGG AATCCGGCGA GGTCCAACAC
GTGGTGCTGC CGGTGTGGCA GGCGATCGTC GGCGCGTTCA ACTACATGGG TGTGGTGGCC
GTGGCCATCG TGGGGCTGTT CAATCCCGCG ACGGCAGGCG AGACCATCTC GAATTCCGTA
AGCGTGGTGG GCATGGCGGT CGTCTCCAAA CAGTACGCGG ATGCCGGCTT GGCCATGTTC
CTGGTGTTCA TGGCGATGAT CTCCGTGTCG CTGGGCCTTA TGAATCTGCT GCCCATCCCT
CCGCTGGACG GCGGCCGGTT CGTCATCGAG ATATATCAGA AAATCACAAG CCGATTCGTG
GGTACGCGCG CCATGAACGC CATGAGCATC GTCGGCGTGA CGCTGTTCAT GCTGCTGTTC
GTGGTCATGC TCAACCAAGA CATACAACGG TTCGTTTTCG GGAACTGGTA A
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| Protein sequence | MTVALEILYL ILVLSILVFI HEGGHFLAAR MFGVRVTEFM LGLPGPKIGF TKGDTMFGVT
AVPLGGYAKI CGMEPGAENP YIEKALAFAY ERGTFYADDF AFQEGISIDD AVEVFYILEE
WGCLVGPKKT DEHNVFYTRA RRIKRKGIDL KEGEPRPFDD AHELYLEERS HTYRSLPFWK
RSVILLAGIF MNLLFVVVVF VVVFSILGMD YTLESGEVQH VVLPVWQAIV GAFNYMGVVA
VAIVGLFNPA TAGETISNSV SVVGMAVVSK QYADAGLAMF LVFMAMISVS LGLMNLLPIP
PLDGGRFVIE IYQKITSRFV GTRAMNAMSI VGVTLFMLLF VVMLNQDIQR FVFGNW
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