Gene Shel_22880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22880 
Symbol 
ID8396177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2536945 
End bp2537322 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content61% 
IMG OID644987036 
Productpredicted membrane protein 
Protein accessionYP_003144647 
Protein GI257064975 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTC TCACCCGTTG GCTGGTGACC ACCGTGGCCG TCGCCGCCGC CGTTTGGATC 
GTGCCGGGCA TATCCATCGC GCAAGGCGCC GCCACCTGGG TTTCCGTAGC GCTGTTAGGC
CTGGTCCTAA CGCTGCTCGA CCAGTCGGTC AAGCCCGTGC TGCGCTTTTT GAGCCTGCCT
CTGACCATCG TCACCCTGGG CCTGTTCTCC ATCGTGGTGA ACGCCCTGGT CCTGCAGCTG
GCTGACTGGC TGGCAAACGG CCTGTTCGAC ACAGGCATCT ACATCCTGTC GTTCGGATCG
GCCCTTGGCG CCGCAATCAT CATCAGTCTG GTCTCCATGC TGATGGAGAG CATCCTGGAG
AAGAACGCGA AAAGCTAG
 
Protein sequence
MQFLTRWLVT TVAVAAAVWI VPGISIAQGA ATWVSVALLG LVLTLLDQSV KPVLRFLSLP 
LTIVTLGLFS IVVNALVLQL ADWLANGLFD TGIYILSFGS ALGAAIIISL VSMLMESILE
KNAKS