| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22610 |
|---|
| Symbol | |
|---|
| ID | 8396150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2503374 |
|---|
| End bp | 2505020 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644987009 |
|---|
| Product | acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II |
|---|
| Protein accession | YP_003144620 |
|---|
| Protein GI | 257064948 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTA CCGATTTCTC GATCATGAAC GCCGCCAAAT ACGGTGACGA TATCGCATTG
GTCGAAGTCA ATCCGGAGGT TCGTGCAAGC CGCGGCAGCT CTTGGCGCGA AGCCGAGTTG
GTCGAAGCCA ATCCGTCCAA CCTCTACCGC CGCGAGCTCA CGTGGCGCAC GTTCAACTCC
ATGGCCAACC GCACGGCGCA TCTGCTGTTG GACGAAGGCT TCGGCAAAGG CACCAAGGTT
GCCATCCTCA TGATGAATTG CCTGGAGTGG CTGCCCATCT ACATCGGCGT GCTGAAGACC
GGCGCCATCG CGGTGCCCCT GAACTACCGC TACGACGCCG AAGAAATCAA ATACTGCCTG
GACCTGTCCG AATCCGATGC GCTCATTTTC GGGCCTGAGT TCATCAGCCG CATGGAGAAG
GTGCACGACT CTCTGGCCAC GGTTACGAAG ACCTACTTCG TGGGCGACGG CTGCCCCGAG
TTCTGCGAAG ACCTGCTGGC CCGCGCCGTT CACTTCTCCA GCGACGAACC TGGCGTGGCC
ATCGACGACG ACGATCTAGG CGCCATCTAT TTCTCCAGCG GCACGACCGG CTTCCCCAAG
GCCATCCTGC ACAAGCACAA GAGCCTGATG CGCGCCGCCA TCACCGAGCA GAAACACCAC
GGCCAGACCC ACGACGACTG CTTTCTGTGC ATCCCGCCGC TGTACCACGT GGGCGCCAAA
ATGCACTGGA TGGGCGGCCT GACGGTGGGC TCCCGTGCGG TTATCCTGCG CGGCGTGAAC
CCCGAGTGGA TCCTGCGCAC GGTGTCCGAG GAGCATTGCA CCATCGTATG GCTGCTGGTG
CCGTGGGCCC AGGACATCCT GGACGCCATT GACGCCGGCA AGGTGAACTT GGACGATTAC
CGCCTGAGTC AGTGGCGCCT CATGCACATC GGCGCCCAGC CGGTGCCGCC TAGCCTGATC
AAACGCTGGA AGAGCGTCTT CCCGCATCAC GAGTACGACA CCAACTACGG CCTGTCTGAA
GGCATCGGGC CCGGCAGCGT GCATCTGGGG GTCGAGAACA TCCACAAGGT GGGCGCCATC
GGCATCGCCG GCTACGGCTG GGAGGCCGAG GTCCGCAAGG AAGACGGCAC AGTGGTCGAG
CCTGGCAGCC ACGAGGTTGG CGAGCTGTGC CTGAAGGGCG ACGGCGGCGT GATGGAGTGC
TACTACAACA ACCCCGAAGC CACGGCAGAG ACGCTGCGCG ACGGCTGGCT GTACACCGGC
GACATGGCGG AAGTGGACGC CGACGGGTTC ATTTACCTGG TCGACCGCAA GAAGGACGTC
ATCATCATGG GCGGCGAGAA CATCTACCCG GTCCAGATCG AAGACTACCT GCGCTCCAAC
GACGCCATCA AGGACGTGGC GGTCATCGGC GTTCCCGACC AGCGCCTGGG CGAAATCGCT
GCGGCCATCA TCGAGTTCAA GCCCGGCCAG GAGAAGACAG AAGAGGAGAT GCGGGAGTTC
TGCATGGGTC TTCCGCGTTA CAAGCGCCCG CGCCGCTACA TCTTCGCCGA GGTGCCGCGC
AACGCTACAG GCAAGATCGA GAAGCCGCTG CTTCGCAAGA TCTACGGAGG CTCCTCCAAG
CTCGTCCGTC AGGAGAGCAC CAACTAA
|
|---|
| Protein sequence | MPITDFSIMN AAKYGDDIAL VEVNPEVRAS RGSSWREAEL VEANPSNLYR RELTWRTFNS
MANRTAHLLL DEGFGKGTKV AILMMNCLEW LPIYIGVLKT GAIAVPLNYR YDAEEIKYCL
DLSESDALIF GPEFISRMEK VHDSLATVTK TYFVGDGCPE FCEDLLARAV HFSSDEPGVA
IDDDDLGAIY FSSGTTGFPK AILHKHKSLM RAAITEQKHH GQTHDDCFLC IPPLYHVGAK
MHWMGGLTVG SRAVILRGVN PEWILRTVSE EHCTIVWLLV PWAQDILDAI DAGKVNLDDY
RLSQWRLMHI GAQPVPPSLI KRWKSVFPHH EYDTNYGLSE GIGPGSVHLG VENIHKVGAI
GIAGYGWEAE VRKEDGTVVE PGSHEVGELC LKGDGGVMEC YYNNPEATAE TLRDGWLYTG
DMAEVDADGF IYLVDRKKDV IIMGGENIYP VQIEDYLRSN DAIKDVAVIG VPDQRLGEIA
AAIIEFKPGQ EKTEEEMREF CMGLPRYKRP RRYIFAEVPR NATGKIEKPL LRKIYGGSSK
LVRQESTN
|
|---|
| |