Gene Shel_22130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22130 
Symbol 
ID8396102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2450543 
End bp2451160 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content50% 
IMG OID644986961 
Producthypothetical protein 
Protein accessionYP_003144572 
Protein GI257064900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0137197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA GCCATGTGAT TTTGAAGGTG GAGCAGCTTG ACAAAGCCGT TCAGGAATAC 
AGAGATAAGG GCTTTGCCGT TGAGTACGGC AAAGAGAAGA ACCCGATCAA CGCTTTGATT
TATTTCTCCA AAGGCCCTTA CATAGAGCTT TTGGATGGAT CGAGAATGCC AGGTGCGGCA
AAGGTCCTTA TGCGTCTGCT GGGGAAAGGG GCGCTTGTTG ACAGGCTGCA ACGTCTCGAT
ACCTGCGGTC TTGGATATTG CGAGCTTGCC TTTGAGAACT ACGAGACTGA TCTAAAAAGA
GAGGTCGCCA TTTTACAGAA ACACGGAATC AAAAGCTGTG GGATGCCAAG CCGCCGAATT
GATACGCACG GCAGGGACTT GCGGTTTCGG ATTGTTTCTC CTGCAGCTCT TGATGTGCCG
TTTCTGATGA CTTATTTTTC TACCGACCCA AAGCCTGTGG ACTTTGTGCA TCCGAATGGC
ATTGCAGGAA TCGACAAGAT CGTTTACGGC ACCGACCCCG CCCGTTTTCC GCTGATAAAG
GAGCTATGCG ACGATGACCG GCTTGAGCTG AAAGCGGGCA ATGGAATCGA GGTTGAGTTT
GAGCGCAGGA AGGGATAA
 
Protein sequence
MKLSHVILKV EQLDKAVQEY RDKGFAVEYG KEKNPINALI YFSKGPYIEL LDGSRMPGAA 
KVLMRLLGKG ALVDRLQRLD TCGLGYCELA FENYETDLKR EVAILQKHGI KSCGMPSRRI
DTHGRDLRFR IVSPAALDVP FLMTYFSTDP KPVDFVHPNG IAGIDKIVYG TDPARFPLIK
ELCDDDRLEL KAGNGIEVEF ERRKG