Gene Shel_21950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21950 
Symbol 
ID8396084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2434578 
End bp2435930 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content66% 
IMG OID644986943 
Productphosphoglucosamine mutase 
Protein accessionYP_003144554 
Protein GI257064882 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.292895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00779909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGAC TCTTCGGAAC AGACGGCGTG CGCGGTGTTG CAAACACCGA GCTGACCTGC 
GCCATTGCAT ATCGTCTTGG TCAGGCTGCC GCCACTTTCC TGGGTTCATC CATCGTAGTG
GGGCGCGATA CGCGCAAGAG CGGCGATATG CTGCAGGCCG CGGTCGTCGC AGGCATCACG
AGCGCGGGCG GCGATGCGCT GCTCGCGGGC GTCATCCCGA CGCCCGGCGT GGCTCTGCTG
GTGCGCGAGC TGAGGGCTGC GGGCGGCATC GTCATTTCCG CCTCCCACAA CCCTCCTGAA
TATAACGGCA TCAAGTTTTT CGACGACCAG GGTTTCAAGC TCCCCGACGA CGTGGAGGAT
TCCATCCAGG CCTTCGTCGA AAGCGGCGGA CTCGAGGCCA ACCTCGCCGA GGGCGAATCC
ATGCCTGTGG GCGATTCCGT CGGCGCCGCC GTCGACGTGG ACGAGGCCTG CGAGATCTAC
ATCCAGCACG CCGTCGACAG CGTGACGTCC CAGGGCATCA CGTTCGAAGG CATGCACATC
GCCCTCGACA CCGGGCACGG AGCCTCGTCG CTGACCAGCG CCGAAGCACT GCGCCGCCTG
GGTGCCCAGG TCACGGTCAT CAACGACGAC TTCGACGGCA ACGACATCAA CGTGGGGTGT
GGGTCCACCA ACCTGGGCCC CTTGAAGCAG CTGATGGCCG AATGCGGCGC CGATGTGGGC
ATCGCCCACG ACGGGGACGC GGACCGCGTC ATGCTGATGG CGAAGGACGG CACCGACATC
GACGGCGACC GTGTCGAAGC CGTCATGGCC GTCGACATGA AGATGCGCGG CGCCCTGCCG
CAGGACACGG TGGTTTCCAC CGTCATGACC AACCTCGGCT TCGTGCGCGC CATGCATGCC
AACGGCATCA AGGTCATCCA GACCAAGGTG GGCGACCGCT ACGTGCTGGA AGCCATGCGC
GAAGGCGGCT ACGCCATCGG CGGCGAGCAG TCCGGCCACA TGATCATGCT GGATTACAAC
TCCACGGGCG ACGGGCTGGT CACGGCCTGC CAGTTCCTGG CGGCCGTCAA GCGCAGCGGC
AAAACCGTGG ACGAGGCCAT CAAGGTCATG GAGCGTCTGC CCCAGACGCT CGTCAACGTG
CGCGTCCGCG ACAAGCATCT GCTGGACGAC AACGAGCCCA TCTGGGCTTC CGTCCGCGAG
GCCGAACAGG CCATGGGAGA TGCCGGCCGC GTGCTGGTCC GCACCAGCGG AACCGAGCCC
CTGGTCCGCG TCATGGTTGA AGCCGTCGAC AAGAAGACCG CCGAGGAGAA GGCCGAGGCC
ATCGCCTCCG TGGTACGGGC CGAAATCGGC TAA
 
Protein sequence
MARLFGTDGV RGVANTELTC AIAYRLGQAA ATFLGSSIVV GRDTRKSGDM LQAAVVAGIT 
SAGGDALLAG VIPTPGVALL VRELRAAGGI VISASHNPPE YNGIKFFDDQ GFKLPDDVED
SIQAFVESGG LEANLAEGES MPVGDSVGAA VDVDEACEIY IQHAVDSVTS QGITFEGMHI
ALDTGHGASS LTSAEALRRL GAQVTVINDD FDGNDINVGC GSTNLGPLKQ LMAECGADVG
IAHDGDADRV MLMAKDGTDI DGDRVEAVMA VDMKMRGALP QDTVVSTVMT NLGFVRAMHA
NGIKVIQTKV GDRYVLEAMR EGGYAIGGEQ SGHMIMLDYN STGDGLVTAC QFLAAVKRSG
KTVDEAIKVM ERLPQTLVNV RVRDKHLLDD NEPIWASVRE AEQAMGDAGR VLVRTSGTEP
LVRVMVEAVD KKTAEEKAEA IASVVRAEIG