Gene Shel_21820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21820 
Symbol 
ID8396071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2416509 
End bp2417201 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID644986930 
Productcytochrome b subunit of formate dehydrogenase 
Protein accessionYP_003144541 
Protein GI257064869 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.137543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GTTACATCAA GCGTCACTCC AAGCAGACGC GTATCACCCA CGGCATCGTC 
GTCATAGCCT GCATCTGGCT GATGATCTCC GGCCTGTTCG TGTTCGTTCC GCCCCTGGCC
GCGGCCGTGG GCGACGGCGT GACCCGTGCG ATGCGCGTAA GCCACCGCAT CGTGGGCTGC
ATCTTCATCC TTGCTCCCAT CGTGAGCGCA TGCATGGCGC CCGGCGGGTT CAAGGCCTTC
CTGCACAAGT ACTTCACCAA GTGGACGCCG CAGGATGTCG AGTTCATGAA GAAGTTCGTG
CCCTACATGC TCGGACCCAA GCGCGTGCAC ATGCCCGACC AGGACGAAGT CAAGTCCGGC
CAGCGCATCG CTGACGGCAT GCTTATCCTG GGCGGCATAG CCATGGCCTT ATCCGGCCTG
GTGCTGCTGC TGGGCACCAG CGTGTTCCAC GCATCCGCAG GGGCGCTGCT GGTCATGCGC
TTCGTGCACG ACCTGTTCTT CATCCTGCTG GTCATCTTCG TGGTCGCCCA CATCTACCTG
GGCGCCGGCA TCTTCCAGCC CTACCGCGGA ACCATCCGCC TCATGTGGGG CGACGGCAAG
GTGTCCGAGT CCAACGCCCT GTACCACTGG GGCTTCTGGG CTCGCGAAGA GCTTGAAAAA
GGCGACAACG TCGTGGTTGA GGAGACGAAG TAA
 
Protein sequence
MAERYIKRHS KQTRITHGIV VIACIWLMIS GLFVFVPPLA AAVGDGVTRA MRVSHRIVGC 
IFILAPIVSA CMAPGGFKAF LHKYFTKWTP QDVEFMKKFV PYMLGPKRVH MPDQDEVKSG
QRIADGMLIL GGIAMALSGL VLLLGTSVFH ASAGALLVMR FVHDLFFILL VIFVVAHIYL
GAGIFQPYRG TIRLMWGDGK VSESNALYHW GFWAREELEK GDNVVVEETK