| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21810 |
|---|
| Symbol | |
|---|
| ID | 8396070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2415595 |
|---|
| End bp | 2416509 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644986929 |
|---|
| Product | uncharacterized protein involved in formate dehydrogenase formation |
|---|
| Protein accession | YP_003144540 |
|---|
| Protein GI | 257064868 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.218643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC GTACGGTGGC TTCTGCCGTT GAGCATTACG AGGCGGAAGC CTCCGAAGCG
GACGTCGCGC GCCTGGAATT CTTCAAGGGC GTCATGCAGA TTCAGCAAGA ACGTGCGGAC
CTCGTGGCTG CTGCCGGCGG CTACGAGGCC CCTCCCCAGG AAGACGCGCG GGCGTGGTAC
TGGGCATACG AGCCGTTCCT CACCCACGCG CCTGTGGATC TGGACCCCGA GGCCTTTGCG
GAAACCTGCC GCCAGCTGGC ATTGCACCTG GCTGCAAGCG CAGGTCTTGA GGACAAGGCC
GCGGATGCGT TGGCCGGCTA CGACTGGAAC GCGTTCTGCG AAACCGCCGA CCTGGCGCTT
GCGGGCAGCC GTCCGCAGGA GTTCGTGGAG TCGTGCCTGA CGGGTATCGA CGGGTTCGGC
GTGAGCCCCG ATCTGCCGGC TACGGTGTTC ATGATGGCGC CGGTTATGGC GCTGCGTGCG
CACCTGCAGG GCGCGGCGAA GACGTGCATG GACGCGTTGA GGCTGAAGAA GGAGGACACC
GCGGTCCACG ACCAGCCCCT GCGCTGCCCC GTGTGCGGGT CTCCCGCGGC GGCTTCGCAC
GTGGTCAGCA CCTCGGGCGT GACCGAAAGC GGCAATCGTG TGCAATACTG CAGCCTGTGC
GGCACGCAGT GGGGCTTCGA GCGCATCCGC TGCGGCGTGT GCGGCAATGT GAACCAGAGC
CAGCTGCACT ACCATCACAT CGAGGGTGAT TCCGCCCACC GTCTGCAGAG CTGCGAGGCC
TGCGGGCAGT ACGAGAGGGT GGTGTTCCAA GACGATCTGG ACCCCCATGC TCCTTTGGTC
ATGGAGGTTG AAGACGTGGT CATGGCCCGT CTGGACCAGG TGGCTTTGGA CCCGCGCTTC
AAGAACGATA ATTAG
|
|---|
| Protein sequence | MDLRTVASAV EHYEAEASEA DVARLEFFKG VMQIQQERAD LVAAAGGYEA PPQEDARAWY
WAYEPFLTHA PVDLDPEAFA ETCRQLALHL AASAGLEDKA ADALAGYDWN AFCETADLAL
AGSRPQEFVE SCLTGIDGFG VSPDLPATVF MMAPVMALRA HLQGAAKTCM DALRLKKEDT
AVHDQPLRCP VCGSPAAASH VVSTSGVTES GNRVQYCSLC GTQWGFERIR CGVCGNVNQS
QLHYHHIEGD SAHRLQSCEA CGQYERVVFQ DDLDPHAPLV MEVEDVVMAR LDQVALDPRF
KNDN
|
|---|
| |