Gene Shel_21710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21710 
Symbol 
ID8396060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2404567 
End bp2405112 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content58% 
IMG OID644986919 
Producthypothetical protein 
Protein accessionYP_003144530 
Protein GI257064858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000349575 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.442012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC AAACGAAGAA GATTCTGGGA ATCGCGATGG TTGCGATGGC CCTTTGCGGC 
ATGCTGGTAC TGGCTGCGTG CTCGTCGAGC GACGAAGGGG CGGATGCGGC CGATTCCGCA
AGCACCGAGA CTCAGGAAGC CGCCGAGCCT GAAGAGGCCG CCGAGCCCGA ACCAGCGGCC
GAGCCTGAAG AGGAAACGGT CGAATCCAAT TACGCCGTGA CCATCGATGG GTCGTCTTTG
GGCGAGGACT ACGAGGGCAA CCCGTGCATC ATCGTCGACT ACACCTGGAC GAACAATTCC
GAGGAAAAGA CCAGTGCTGC GGCTGCGCTT TATTCGAAGG CCTACCAGAA CGGAGTCGAG
CTTGAGCGCG GGATAGTTTC CGACATCGAC AACGACAGCG AATGGAACGA CGTAAAGCCC
GGTGCAACCA CGTCCTACCA GGTTGCATAC CTGTTGGATG ACACGTCCGA AGTCGAGGTC
GAAGTCGAAG ACAGCTGGCA GTGGGAAGAG ACCATCATCG CGACGGCCAC GTTCAGCGTG
GAATAG
 
Protein sequence
MKKQTKKILG IAMVAMALCG MLVLAACSSS DEGADAADSA STETQEAAEP EEAAEPEPAA 
EPEEETVESN YAVTIDGSSL GEDYEGNPCI IVDYTWTNNS EEKTSAAAAL YSKAYQNGVE
LERGIVSDID NDSEWNDVKP GATTSYQVAY LLDDTSEVEV EVEDSWQWEE TIIATATFSV
E