Gene Shel_20180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20180 
Symbol 
ID8395907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2251274 
End bp2251591 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content51% 
IMG OID644986769 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_003144381 
Protein GI257064709 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0624754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAG CATTCTTCCA GGGCAACGTC TCAACTGAGC CTGAATTGCG CGGTGTCAAC 
AAGAACGTTT TAACGTTTTC GGTAGCCGTC AACACGCGCA AGAAAGACCC CGACTCCGAC
AAATGGGTTG AAGCACCGCA ATTTTTCCCC TTCGTGATGT TCGGTAAACG CGCCGAAGCA
GTTGGCTCAT TCTTGAAAAA AGGAGCCGCC GTCAGCATCG AAGCTACCCC GTCGCAGAAC
GTCTGGGAAG ACGAAAAAGG CAAGCGCTCG TCAATCGAAT TCATCGTTGA TGACATTCAC
GTTGACGCCA CTCGGTGA
 
Protein sequence
MLKAFFQGNV STEPELRGVN KNVLTFSVAV NTRKKDPDSD KWVEAPQFFP FVMFGKRAEA 
VGSFLKKGAA VSIEATPSQN VWEDEKGKRS SIEFIVDDIH VDATR