Gene Shel_19790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19790 
Symbol 
ID8395868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2209843 
End bp2210784 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content62% 
IMG OID644986730 
Productaldolase 
Protein accessionYP_003144342 
Protein GI257064670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.388013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA TCACTCGTGA TCAGGTCAAG GTCCCGGCTG ACGTGCTTGC GGACGCCCGT 
GAAACCTATA TCGACAACTA TATGAAGGCA ACGCAGGGCA CCGGACGCCT GATGCTGTTT
GCCTGCGACC AGAAGGTCGA GCACCTCAAC GGCGACTTCT ATGGTGAGGG TATCGACATC
TCCGACTCCG ATCCTGAGCA TCTGTTCAAG ATCGCAGACC AGGGCGTCTG CGGCGTCATG
GCCGGCCAGC GCGGCCTCAT CGCCCGCTAT GCGGCCGATT ACCCCAACGT GAACTATCTG
GTGAAGATGA ATTCTAAGAC CAACCTGGTC AAGACCGCCC AAGATGACCC TTATAGCCCG
CAGCTCCATG ACATCGAGGC CGTTCTGGCC ATGCGCGACA ACGGCGTCAA CGTCGTCGGC
CTTGGCTACA CCCTGTATCT GGGCAGCGAA TACGAAGCCA CCATGCTTGC CGAAGCGGGT
CAGCTCGTGG CTCAGGCCCA TGAAGAAGGC CTGATCGTGG TCCTCTGGAT CTATCCTCGC
GGCAAGGCCG TCGGAAAGGA CGAGAAGGCA CCTACCACCA TCGCAGGTGC CGCCGGCGTG
GCCCTGTGCT TGGGCGCCGA CTTCGTTAAG GTGAACCCGC CTGTGGCCAC CGAGGACAAG
ACCTCTGCCG AGAACCTGGC CGTCGCTTCG GCCGCTGCTG GCCGCACCGG CCTGGTCTGC
GCCGGCGGTT CCACCGTCGA GGCCAAGGTC TTCCTGCAGC AGCTGCATGA CCAGATCTAC
ATCGGCGGCG CTTCCGGCAA CGCGACGGGC CGCAACATCC ACCAGCGCTC GCTGGACGAG
GCTGTCCGTC TGACCAAGGC AATTTCCGCC ATCACGCTGG CCGACTACGA CGTCGACCGC
GCCTTGGCCG TCTTCAACGG CGAAGAGGAT TTCGCGCTGT AA
 
Protein sequence
MPKITRDQVK VPADVLADAR ETYIDNYMKA TQGTGRLMLF ACDQKVEHLN GDFYGEGIDI 
SDSDPEHLFK IADQGVCGVM AGQRGLIARY AADYPNVNYL VKMNSKTNLV KTAQDDPYSP
QLHDIEAVLA MRDNGVNVVG LGYTLYLGSE YEATMLAEAG QLVAQAHEEG LIVVLWIYPR
GKAVGKDEKA PTTIAGAAGV ALCLGADFVK VNPPVATEDK TSAENLAVAS AAAGRTGLVC
AGGSTVEAKV FLQQLHDQIY IGGASGNATG RNIHQRSLDE AVRLTKAISA ITLADYDVDR
ALAVFNGEED FAL