Gene Shel_19700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19700 
Symbol 
ID8395859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2205109 
End bp2205618 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID644986721 
Productribosomal protein L17 
Protein accessionYP_003144333 
Protein GI257064661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00763987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.431624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCATA ACGTTAAGGG CCGCAAGCTG GGCACTGACT CCAGCCACAC CAAGGCCATG 
AAGAAGTCCT TGGTCCGTGC TCTGTTCTTG AACGACCGCA TCAAGACGAT CGAGTCTCGT
GCCAAGGAGA TTCGTCCTGA CGTCGACAAG ATCATCACCT GGGCCAAGCG TGGCGACCTG
CATTCTCGCC GTCTCGCCAT CGCAGCCCTG GGCGACAAAG AACTCGTCCG CGAGGTGTTC
GAGAAGGTTG CGCAGGGTCA GTTCCAGGAT CGCAACGGCG GCTACACCCG CATCTACAAG
CTGGGCCCCC GCAAGGGCGA CAACGCTCCC ATGGTCATCA TGGAGCTGTG CACCGATCCG
GTGAAGCCCA AGGCTGAGAA GGCTGCCCCC AAGGCTGAGC CCAAGAAGGT TGAAGCCGCT
CCGGCTCCCG CAGAGGAAGT CGAAGAGGTG GCCGAGGCCG AAGAGGCTGT CGAGGCTGTG
GCCGAAGAGG CTGAGGAGAA GGCCGAATAG
 
Protein sequence
MRHNVKGRKL GTDSSHTKAM KKSLVRALFL NDRIKTIESR AKEIRPDVDK IITWAKRGDL 
HSRRLAIAAL GDKELVREVF EKVAQGQFQD RNGGYTRIYK LGPRKGDNAP MVIMELCTDP
VKPKAEKAAP KAEPKKVEAA PAPAEEVEEV AEAEEAVEAV AEEAEEKAE