| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19390 |
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| Symbol | |
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| ID | 8395828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2172481 |
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| End bp | 2174994 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986690 |
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| Product | Excinuclease ATPase subunit |
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| Protein accession | YP_003144304 |
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| Protein GI | 257064632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000025916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGGA CACGCAAGCC TGCGCCGCAG GCAATGGAGA TTCGCGGCGC ACGTGTGCAC
AATTTGAAGA ACGTAGATGT CGACATCCCG CTGAACAAGC TGGTGGGTGT GGCAGGCGTA
TCGGGCTCAG GCAAATCGTC GCTGGCGCTT GGCGTGCTGT ATGCCGAAGG GTCGCGGCGC
TATCTGGAGG CGCTTTCTAC CTACACGCGT CGACGCATGA GCATCGCTGC CGAGGCCGAT
ATCGATCGGG TGGAATACGT TCCTGCCGCG CTGGCGCTTC ATCAGAGGCC TGCGGTTCCC
AGTGTGCGAA GCACCTTCGG CACCTCGACC GAGCTCCTCA ACGTGCTGCG ACTGATGTTC
TCGCGGTTGG CCAGCCACCG TTGTCCGAAC GGCCACATGG TGCCGCCTTC GAAAAACGTA
GCCGCCGAGC TACCCATCGT TTGCCCCGAA TGCGGGGAGG AGTTCTACGG CCCGGGTGCG
GAGTCTCTGG CGTTCAACAG TGAAGGCGCC TGCCCGACCT GCCAAGGCAC GGGCATCATG
CGCACGGTGG ACGAGTCGAA GCTGGTTCCC GACGAGTCCC TCACCATCGA CGAGGGCGCC
GTGGTTCCTT GGGGCTCGCT CATGTGGTCG CTCATGACCG ATGTCGCCCG CGAGATGGGC
GTGCGCACCG ACGTGCCGTT TTGCGAGCTG ACGCCCGAAG AGCGCGACAT TGTGTTCCAC
GGTCCAGCCG AAAAGAAGCA CATCCTGTAC AAGGCGAAAA AGACCGACAC CTTCGCCGAG
ATGGATTTCA CATACTACAA CGCGGTGTAC ACGGTGGAAA ACGCGTTAAG CAAGGCCAAA
GACGAGAAGG CGCTCGCCCG CGTGCAGCGG TTCTTGAGGG AGGATGTCTG TTCCGAATGC
GGCGGCACGC GTCTGTCCGA AGCTTCCCGT GCGCCGCTCA TCAAGGGCAT CGATTTGGCC
CAGGCGACGG CCATGACGCT GGAAGAGGCC TACGAATGGG TCCAGACTGT TCCGTCGTGG
GTGCCAGAAG ACATGCGAGA CATGGCGGAA AGCATCGTGT CCCAGTTCGT ACATACGGCG
AAACGTCTTC TTGATTTGGG ACTGGGCTAT CTGTCGCTGG ACCGTGCCGG GTCGACGCTC
TCCACTGGCG AACGCCAACG CGTCCAGCTT GCCCGGGCAG TGCGCAACCG CACCACAGGC
GTGCTCTACG TGTTGGACGA ACCGTCCATC GGCCTGCATC CTTCGAACAT CGACGGGCTT
CTGGAGGTCG TCGACGACCT GCTGGAATAC GGCAACTCCG TCGTGCTGGT CGACCACGAC
GTCCGCATGC TGCGTGCCGC CGACTGGATT GTGGAAATGG GCCCCGGATC GGGTGCTTCG
GGAGGGCGCG TGGTGGCCGA AGGCCCCGTG GATGCTGTGG TGGCCAATCC CGCATCCCGC
ATCGGAGGCT TTCTGGCCGG CACCGAACAG GTCGTAGTGC GCGAGCGGGC ATCCGAAGAA
GAGCTGTTCG AGCACGGCAT CATCCATCTG CAGACGAGCC CCATCCATAC CGTGCACGGG
CTGGAGCTGG ATATTCCCAA GGGTCGTCTG ACGGCCGTCA CGGGTGTTTC GGGATCGGGC
AAGACCACGC TGGTGTTGGA AAGCCTGGTG CCGGCGCTGC ATGCCGCGAC GGCCGGCGAG
CAGCTTCCCT CCCATGTGAG GGCCGTTTCG GCAGAAGGCA TAAAACGAGC GAGCCTCATA
GACGCCACGC CTATCGGTGC CAATGTCCGC TCGACAGTTG CCACGTACAG CAATGTGTTG
GATGACCTGC GACGGCTGTA TGCGTCGCTG CCCTCTGCAA AGGCGGCGGG CCTTTCACTT
AAAGACTTTT CGTACAACAC AGGGTCGCTC AAATGCCCGG TCTGCGAAGG CACCGGTCAA
ATTTCCCTGG ACGTGCAGTT CCTTCCTGAC GTGGACATTC CCTGTCCCGA GTGCCGCGGC
GGGCGCTACG CGAAAACGGC GTACGAACAT CGCTACGTAT CGTCCATTCA GGATGCGCGG
TTCCCTGGCG GCATATCGCT TCCCGAACTC ATGTCGCTTA CCGTGGATGA GGCGCTGGCC
TTCATGAGGA ACGAGAAGAG GATCGCCCAT AAGCTTCAGA CGTTGGCTGA CCTGGGTTTG
GATTACCTGA CGTTAGGAGA GGCGACGCCT GCGTTGTCCG GCGGCGAGGC GCAAAGGCTC
AAGCTTGCGA CGGAGATGGG GAAGAGCCAG CAGAGCTCGG TATTCGTATT CGACGAGCCT
ACCATCGGCC TGCACCCGCT CGATGTCCGC ACGCTGATAG GCGTGTTCCA AAGTCTGATC
GAGGCCGGAG CGACCGTAAT CGTGATCGAG CACGATCTGG ACATGATCGC CAATGCGGAC
TATGTGGTCG ATATGGGCCC CGGCGGAGGA GAGGCCGGCG GACGCATCGT TGCCTGCGGA
ACGCCGGCGG ATATCGCAGC CGACCCAGAG AGCATTACCG GACGCTACCT GTAG
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| Protein sequence | MSRTRKPAPQ AMEIRGARVH NLKNVDVDIP LNKLVGVAGV SGSGKSSLAL GVLYAEGSRR
YLEALSTYTR RRMSIAAEAD IDRVEYVPAA LALHQRPAVP SVRSTFGTST ELLNVLRLMF
SRLASHRCPN GHMVPPSKNV AAELPIVCPE CGEEFYGPGA ESLAFNSEGA CPTCQGTGIM
RTVDESKLVP DESLTIDEGA VVPWGSLMWS LMTDVAREMG VRTDVPFCEL TPEERDIVFH
GPAEKKHILY KAKKTDTFAE MDFTYYNAVY TVENALSKAK DEKALARVQR FLREDVCSEC
GGTRLSEASR APLIKGIDLA QATAMTLEEA YEWVQTVPSW VPEDMRDMAE SIVSQFVHTA
KRLLDLGLGY LSLDRAGSTL STGERQRVQL ARAVRNRTTG VLYVLDEPSI GLHPSNIDGL
LEVVDDLLEY GNSVVLVDHD VRMLRAADWI VEMGPGSGAS GGRVVAEGPV DAVVANPASR
IGGFLAGTEQ VVVRERASEE ELFEHGIIHL QTSPIHTVHG LELDIPKGRL TAVTGVSGSG
KTTLVLESLV PALHAATAGE QLPSHVRAVS AEGIKRASLI DATPIGANVR STVATYSNVL
DDLRRLYASL PSAKAAGLSL KDFSYNTGSL KCPVCEGTGQ ISLDVQFLPD VDIPCPECRG
GRYAKTAYEH RYVSSIQDAR FPGGISLPEL MSLTVDEALA FMRNEKRIAH KLQTLADLGL
DYLTLGEATP ALSGGEAQRL KLATEMGKSQ QSSVFVFDEP TIGLHPLDVR TLIGVFQSLI
EAGATVIVIE HDLDMIANAD YVVDMGPGGG EAGGRIVACG TPADIAADPE SITGRYL
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