Gene Shel_19040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19040 
Symbol 
ID8395793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2136356 
End bp2136766 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content66% 
IMG OID644986655 
Producthypothetical protein 
Protein accessionYP_003144269 
Protein GI257064597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0646668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAC ACTCGCGTCG GATAGACCTG CGCGTAACCG AGGAAGACCT CGCGTCAGCC 
AAAACGCTTG CCGACGAGTG CGACATGACG GTGTCCGACG TCGTCCGCAT CCTGCTCCGG
CTGCCCCGCG AATACGTCGC CGGCACCGAT GCGCGCCCCG TGCTCGTGGT CGACGCCGTT
TCCGCGCGCA AGCTCGCACG CGAGACCCGA TGGTGGGGCT ACCAGTACAA CCAGATCGCG
CACGCGCTGA ACCGGATCGC CATGTACCTG CGCCGCGACA TGTGCGACGC CGCCGACGCG
CTCGAGCAGC TGCAGGTCGT CGAGGAGAAG GTCGATTGCG CCAACGCCGA CATCGCAGTG
CTTCGCGCCG AGGCTCAGCG CATGGCCGCC ATGTTCAACG TGAAGAAGTG A
 
Protein sequence
MQKHSRRIDL RVTEEDLASA KTLADECDMT VSDVVRILLR LPREYVAGTD ARPVLVVDAV 
SARKLARETR WWGYQYNQIA HALNRIAMYL RRDMCDAADA LEQLQVVEEK VDCANADIAV
LRAEAQRMAA MFNVKK