Gene Shel_18890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18890 
Symbol 
ID8395778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2119038 
End bp2119472 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content70% 
IMG OID644986640 
Producthypothetical protein 
Protein accessionYP_003144254 
Protein GI257064582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.318653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.042597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCG GTTCCAGGGA AACGCTCTTT AGTGCGATCA GGGAGAACCC GTGGATCGCC 
GAGAAGGCCG ACGTGCGCAG GATCCATGAG GCCGTCGGGC CCAAGGGCCT GAAGAAGCTC
CTGCACGACC GCTGCGAGAC CGGCGACTGC GCCGTGCTCG ACGACGTCGC TTTCGCGAAG
CAGTCCGCCG GAGAGCTCTG GCTCGCCCTC AAGCGCGACG GCGACACATG GCACGGCTTC
GAGTCGATGC CCGCCGCGCG CATCGCCGAG GAGGACCCGG CCCGCTTCGA CGCGCTGGTC
GAATCCATGA GGTACGCGAC CCCCGAGCAG TGCAGGCGCC TCCAGTACAG GCCGCTATCC
GACAGGTCGG AGTTCGCGCG CGCCGCCGCC GACCGCGGCG GCGAGGCCAG GTCCCTGCCC
GGCGAAGCGC GCTAG
 
Protein sequence
MLPGSRETLF SAIRENPWIA EKADVRRIHE AVGPKGLKKL LHDRCETGDC AVLDDVAFAK 
QSAGELWLAL KRDGDTWHGF ESMPAARIAE EDPARFDALV ESMRYATPEQ CRRLQYRPLS
DRSEFARAAA DRGGEARSLP GEAR