Gene Shel_18780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18780 
Symbol 
ID8395767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2108993 
End bp2109409 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content49% 
IMG OID644986629 
Productputative glucan synthasis protein 
Protein accessionYP_003144243 
Protein GI257064571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0453601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.217838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA AAATCAAGGA GCTCATCTCA AAGTATGAGG ACGAGGGCTT TTTTACGCGG 
GTGCCTCCTA CTCCCGAGAT GGTCAAAGAG GCACAGGAGA AGCTCGGTGT AGAGATCCCC
GAGCAGTTCC TGGAATACCT CAACATCTAT AGCTATGGAG GAATCAACGG AACCGAGATT
TTGGGAATCG GCATGACTGG CAAGATCATG TTTCTCGAGG AGACGTTGGA GTATCGTCGC
TATGGGCTCC CGAATAATCT CATCGTTGTG GAAAACTGCG ACGAATGGGT CTATTGCCTC
GATGCGGAAA CTGGAAAGGT GGTCTCTTGG TCGCAGCTGG ATGGTCTCAA GGATGAGTAT
CCGTCATTTG ATGACTTCCT ACTCGATGAG CTCAACGAAG CTATTGCCAA CTTGTAA
 
Protein sequence
MNDKIKELIS KYEDEGFFTR VPPTPEMVKE AQEKLGVEIP EQFLEYLNIY SYGGINGTEI 
LGIGMTGKIM FLEETLEYRR YGLPNNLIVV ENCDEWVYCL DAETGKVVSW SQLDGLKDEY
PSFDDFLLDE LNEAIANL