Gene Shel_18620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18620 
Symbol 
ID8395751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2086469 
End bp2087152 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID644986613 
Producthypothetical protein 
Protein accessionYP_003144227 
Protein GI257064555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.510111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAGCC TGGTCAACCA TTGGCACGAG GTATCCGTTT TCCTGGCAGG AGCAGTGGCT 
GTCTGCGCGA TTCTGCTGGT CGAGGACCCT GTGCAGAAAT GCCTGCTCGC CGCCATCGTA
GCGATGCTGT TGCACTTCTT TGAGGAGTTC GGCTTCCCCG GCGGCTTTCC GCATATGGGA
GTGAAGGCGC TGTTGGGAAG CGACGAGCCC GACTCCACGA AATGGCACTG CAACAACCTG
AATTCCATGT TCGGCAACTG GACCGCGCTG CTGCTGCTCT ACATCGTGCC GTTGCTTTTG
CCGGGGGTGC GGTTCCTGAC GCTGTCGGCC ATGATGTTCC TGTTCGCCGA GGTGCTCATG
CATCTGGTGC TGTTCAACAT GCGGCAGAAA AGCCTCTACA ACCCTGGCAT GGTGACGGGC
GTCGTGCTCA TGGGCGCTAT CGGCATATAC TACTTCACTT CCGTGTTCGA TGCATCGGCG
GTCGTGTGGT GGGACTGGGC GCTGGCAGTC GTATGGTTCG TCGCGGTATT CGTGCTCTGC
TTCCGCTCGC CTTTGTACTG GAAGCTTGGC GACAAGCCTG GATTCCCCTT GACGCAGCAG
ACCGCATTCG GCCTTGCAGC CAGGTCCGTA GACGGCGAGG CCGGCAGGGC ATCAAACATT
GCCTTTGCCG AGAGCCGCGA ATAA
 
Protein sequence
MKSLVNHWHE VSVFLAGAVA VCAILLVEDP VQKCLLAAIV AMLLHFFEEF GFPGGFPHMG 
VKALLGSDEP DSTKWHCNNL NSMFGNWTAL LLLYIVPLLL PGVRFLTLSA MMFLFAEVLM
HLVLFNMRQK SLYNPGMVTG VVLMGAIGIY YFTSVFDASA VVWWDWALAV VWFVAVFVLC
FRSPLYWKLG DKPGFPLTQQ TAFGLAARSV DGEAGRASNI AFAESRE