Gene Shel_18090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18090 
Symbol 
ID8395699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2041319 
End bp2042188 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content63% 
IMG OID644986562 
Producttranscriptional regulator 
Protein accessionYP_003144176 
Protein GI257064504 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCG AGGACTTGGA ACGGTATCTG GCTGTGGTGC GGGAAGGCAC CATTTCAGGG 
GCCGCCGCCG CATTGCATAT CGCCCAGCCG TCCCTTTCGC GCCAGATGCG CGATTTGGAA
GAAGGCCTGG GGGCCACGCT GTTCGAGCGC GGCAACCGGC GCATCACTCT GACCGAAGAG
GGCATGATCC TGCGCAGGCG CGCGGAGGAG ATCGTGCGGC TCGTCCGCCA GGCCGAACGC
GAGGTGGCCG AGGCGGGCAG CTCGGTTTCG GGCGACGTCT ACATCGGTGC GGGGGAGTCG
CAGGCGTTCC ATGTTATCTC GCAGGTGGTG GCCCGCGTGC AGGCCGACCA CCCCGACATT
CGCTTCCATA CCGTGAGCGG CGACACGCAG GACCTGATGG ATCAGATAGC GAACGGCCTT
CTGGACGTCG CACTCGTGTT CAGCGACTTC GACCAGGCCT TGTACCAGTC GGTGGCGGTT
CCCGATGCGG ACGCCTTCGG CATCCTGATG CGCAAAGACG ATGCCCTTGC AGCCAAAGAT
TCGGTAACCT ATGACGACCT GGCCGGCCGG CCCGTGCTCG TGTCACGCGC GTTCATGCCG
GCAGCCGAGG GGAGCGAGGC GCTGCGTTCG CTACGCATTG CGGGCACGTA CAACCTAATC
TATAACGCCT CGCTTATGGT GGAGGACGGC ATCGGCATTG CGTTGGCATT CGGCGGATTG
GTGAACACCG GTCCAGAAAG TTCGCTGTGT TTTCGACCGT TGGAGCCTGC GCAGCAGGTC
ACAGGCCGTG TGATTTGGAA GAAATACCAG GTGTTCGCGC CGGCGGCCCA GCTGTTCGTG
GACGCGTTGA AAGAATCGCT TGTCCGATAG
 
Protein sequence
MDVEDLERYL AVVREGTISG AAAALHIAQP SLSRQMRDLE EGLGATLFER GNRRITLTEE 
GMILRRRAEE IVRLVRQAER EVAEAGSSVS GDVYIGAGES QAFHVISQVV ARVQADHPDI
RFHTVSGDTQ DLMDQIANGL LDVALVFSDF DQALYQSVAV PDADAFGILM RKDDALAAKD
SVTYDDLAGR PVLVSRAFMP AAEGSEALRS LRIAGTYNLI YNASLMVEDG IGIALAFGGL
VNTGPESSLC FRPLEPAQQV TGRVIWKKYQ VFAPAAQLFV DALKESLVR