Gene Shel_18050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18050 
Symbol 
ID8395695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2036698 
End bp2038074 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content62% 
IMG OID644986558 
Productsignal transduction histidine kinase 
Protein accessionYP_003144172 
Protein GI257064500 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA CCAAGAACAG GAAGAAGCTC TCAAGCCGCT TGTTCGCTGC GTTCTTCCTG 
CTGTCCTTGG TCGTATTCCT GGCCGCCACA ACGACCGTCG TGGCCATGAG CTGGATGGTG
TACGAAGGCA ACGCCGAAGA GCGGTTGGTG CACCAGACGG AAACGACGGC AGCTGATTTG
CGCGGCATGG ATACCGAGGA GATGAAGGCG GAGCTGGCCC GCACGGCCCT TGCTGACACC
CGCATAACGC TAGTCGCCCC TGACGGGACC ATCCTGTACG ACACCGACGC CGACCCGTCG
ACCATGGCCA ACCACGCCGA CCGAGAAGAA ATCTTTTCGG CCCGGCACGG CGACGAGATC
GTAGTGCACC GCAGGTCGGC AACAACGGGT ACAGACACCG TCTACGCGGC TGTCGCCGTC
AATGACGAAG ACGTGGTTCT AAGGCTCGCG GAGACCCGAA CATCCCTCCC CTATTACTTG
AGAAGCCTGT TCGTCCCACT CGCGTTGGCG GCGCTTCTAG CTGCGGCCCT GTCCGCAGCG
CTGGCCCGGA CCATCACCCG CATGGTTGTC ACGCCTCTTC TGTCCGTCGA TCTGGATGAG
CCTCTAGAAA GCGAAGCTTA CGAGGAGGTG GAGCCGCTCC TGTCCCGCAT TGCGACGCAA
CGTAGCGAGC TTATCGGCCA AAATGAGCAG CTTGAAAAGT CCATGAACAT GCGCAAGGAA
TTCACCGGGA ACGTCAGCCA CGAGATGAAA TCGCCGCTGC AGGTTATCGG CGGCTATGCG
GAGCTCATCG AAAGCGGCGT GGCCGGTCCC GAGGACACGA AGCGGTTCGC CAGCCTAATC
AGGTCAGAAT CCCATGCGAT GCGCGAGCTC ATCGATGACG TGCTTCTGCT GTCCAAATTG
GACGAGAACG CCTTCGGCGA ACCACTTCCC ATCGACCTTT CGGAAGTGTG CCTGCGCGCC
GTAGCCCGAC TGGAGAACAC CACACAGGCC CACGGCACCG AAATCCGCAC CGACTGCCCT
TCGGGGATGT TGATCTTCGG GTCGCAGGCC CTGGCCGACC AGGTGGTGTG CAACCTGCTG
GAAAACGCCA TCCGATACGG CGGAGGCTTG GTTGAGGTGA AGGTGGCCAG GTGCGGCGAA
AACATCGAGC TGTCGGTGGC GGACAACGGC CCGGGCATCC CCGACGACCA GAAGGAGCGA
GTGTTCGAAC GGTTCTACCG CATGGACCCG TCGCGCTCCA GGGAGACCGG CGGCACGGGA
CTCGGCCTTG CCATTGTAAA ACACGCCACC CAGACCATGG GAGGAACCTC TTACACAGAG
GATTCGGAGC TCGGCGGCGC CCGACTGTGC GTCAGGGTGC CGGCGGCTTC GGCATAA
 
Protein sequence
MAQTKNRKKL SSRLFAAFFL LSLVVFLAAT TTVVAMSWMV YEGNAEERLV HQTETTAADL 
RGMDTEEMKA ELARTALADT RITLVAPDGT ILYDTDADPS TMANHADREE IFSARHGDEI
VVHRRSATTG TDTVYAAVAV NDEDVVLRLA ETRTSLPYYL RSLFVPLALA ALLAAALSAA
LARTITRMVV TPLLSVDLDE PLESEAYEEV EPLLSRIATQ RSELIGQNEQ LEKSMNMRKE
FTGNVSHEMK SPLQVIGGYA ELIESGVAGP EDTKRFASLI RSESHAMREL IDDVLLLSKL
DENAFGEPLP IDLSEVCLRA VARLENTTQA HGTEIRTDCP SGMLIFGSQA LADQVVCNLL
ENAIRYGGGL VEVKVARCGE NIELSVADNG PGIPDDQKER VFERFYRMDP SRSRETGGTG
LGLAIVKHAT QTMGGTSYTE DSELGGARLC VRVPAASA