Gene Shel_17970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17970 
Symbol 
ID8395687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2030497 
End bp2031567 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID644986551 
Productpredicted Fe-S oxidoreductase 
Protein accessionYP_003144165 
Protein GI257064493 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCT TGAAAGAACA GCACCTCAAC CAGCTGGCCG ATTACACCCG GCAGCTTTAC 
CGCGCTCCCG AGCTGCGCAA GCTGTTTCTG GAACTCACAC TGCAATGCAA CGAGCATTGC
TGGCACTGCG GCAGCAGCTG CACCGCTGCC CGCGGCGACG AGCTGTCGAC CCAGGAATTC
TGCAGCGTCA TAGACCAGGT GAAGATAGAC TTCGCCGACA AGCTCCCCTA CCTGTGCATC
ACGGGCGGCG AGCCTTTGCT GCGCCACGAT TTCTTCGACA TCATGGGGCA TGCGCACAGG
CTGGGATTCG ACTGGGGCAT GACCAGCAAC GGCACGCTCA TCACGCCCGA AGTGGCCCAC
AAACTGGCGG CATGCGGCAT GCGCACCGTT TCGATATCGA TAGACGGAAC GCCTGAAAGC
CACGACCGGT TCCGCGCGAG CTCCAGCGGG TTCGACCGCG CGATGGCAGG CGTGCAGAGC
CTCATCGACG AAGGCGCCTT TTCCAGCGTA CAGGTGACCA CTGTGGTGAA CCACGTGACC
GTGAACGAGC TGGACGCGAT GTTCGACATG CTTGGCGACG TGGACATCGA TTCGTGGCGC
GTCATCAACG TGGAACCCAT CGGTCGCGCG CTGCAACGCC CCGACCTGAT GTGCACGCCT
GACGACTTGC GCCGCATGTT CGGGTTCATC CGCGAGAAGC GCGCCCAGGG CTGGCCCGTG
GAGTACGGCT GCAGCCACTA TCTGGGACTG GACTTCGAGG TGGAGGTGCG CCCCTGGTAC
TGGCTGTGCA ACGCGGGCGT GTACACGGCG AGCGTCACGT CCAACGGCGA CATCGCCGCA
TGCCTGGACA TCCCCCGCCG ACCCGACACC GTGCAGGGCA ACATTCGCAA GCGTCGGCTA
CGCGATGTGT GGGAAAACGA GTTCACCTTG TTCAGGCGCG ATATCGGCGA CTCCTGCGAG
GAGTGTTGCT CCTGCGAGCA CATGCGCTTC TGCCGCGGCG GCGCCTGCCA TAGCTGGGAT
TTTGACGCCA ACCGCCAGCA AATCTGTCTG AAAGGCGTGC TCTTCGACTG A
 
Protein sequence
MHALKEQHLN QLADYTRQLY RAPELRKLFL ELTLQCNEHC WHCGSSCTAA RGDELSTQEF 
CSVIDQVKID FADKLPYLCI TGGEPLLRHD FFDIMGHAHR LGFDWGMTSN GTLITPEVAH
KLAACGMRTV SISIDGTPES HDRFRASSSG FDRAMAGVQS LIDEGAFSSV QVTTVVNHVT
VNELDAMFDM LGDVDIDSWR VINVEPIGRA LQRPDLMCTP DDLRRMFGFI REKRAQGWPV
EYGCSHYLGL DFEVEVRPWY WLCNAGVYTA SVTSNGDIAA CLDIPRRPDT VQGNIRKRRL
RDVWENEFTL FRRDIGDSCE ECCSCEHMRF CRGGACHSWD FDANRQQICL KGVLFD