Gene Shel_17910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17910 
Symbol 
ID8395681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2022809 
End bp2023429 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID644986545 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144159 
Protein GI257064487 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.425788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT ACGCAATGGC AGTGGACAAG ACCCGCTGCA TCGGATGCCA TGCCTGCGCC 
ATGGCCTGCA AGGTGAACAA CAATCTGCCC AAGGACGTAT GGTGGAACAC GATCCGCATG
TCCGAAGGCC AGCCTTTCGA CTGCAGCGTC GGCGAATACG GCGGAGAGCT GAGCCTTGAA
TACCATCCCG TGAACTGCCA GCACTGTGCG AATCCGTCGT GCTTGACCGT GTGCCCCACG
GGCGCCACGC AGCAGCGCGA GGACGGCATC GTGTGGGTGG ACACCGAGCT GTGCATCGGC
TGCGACTCCT GCATAAACGC ATGCCCCTAT GACGTGCGCC GGCATTTGGC CGACGACCTG
GAGTTCTACA CCGAGCACGC CATCGGCGAC GTGGCAGCTC CCCAGCATGC GGCCGGCAAG
GTGGGCAAGT GCGACTTCTG CAAGGGCCGC ATCGACCGCG GCGAGGCGCC CGCCTGCATG
GTGCTGTGCC CGGGCCGCGC CCGCTACTGG GGCGACATCG ACGACCCCGA AAGCGAGATC
TCCAAGGCCA TCGCGGGCCG CGAGATCGAG CTCTTGTTCG AAGAGGCCGG CACCGAGCCC
CAGTTCTTCT ACTTCAAGTA A
 
Protein sequence
MTRYAMAVDK TRCIGCHACA MACKVNNNLP KDVWWNTIRM SEGQPFDCSV GEYGGELSLE 
YHPVNCQHCA NPSCLTVCPT GATQQREDGI VWVDTELCIG CDSCINACPY DVRRHLADDL
EFYTEHAIGD VAAPQHAAGK VGKCDFCKGR IDRGEAPACM VLCPGRARYW GDIDDPESEI
SKAIAGREIE LLFEEAGTEP QFFYFK