Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17540 |
Symbol | |
ID | 8395644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1982743 |
End bp | 1983882 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986508 |
Product | hypothetical protein |
Protein accession | YP_003144122 |
Protein GI | 257064450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.316809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCT ATCCGAACAA CAGCAACGGC AATTCGCAAG GCGTTATCTC CCAGGTCGTT TCGACTGGGG CAGATGCCGT CGTTCGCGCG ACAAAGGCTG CCAACCGGGC CGTTTCCTCC CTTGACTTCG ACGGGTTGGG CGCTACGCTT GCGAATGCTG CGCAGCACGC CATTGACCAG GTCAGAGGGT ATTCGCAGGC TCCCGTCCGC TCGCCTTACG TCATCACGCC GAAGCGCACG GGGCTGGTGG GCGGCCTTCA GGTTGCGGGC GGAGTCGTCC TGCTGGCCAC GGCCGTCAGC TCGCTGGTGT TCTCGCTCAT CTTCACCCAG ATCAACGGCG TTCTCGCTGC CATGGGGTTT CTTTCTACGG CCGCATTCGT GGCAGGCGGC GTTGCTCTGG TGTCCCGCGG CACCGACACC TTCGGCCTTG GTGCCTATAT AGATAGGATT GCCTACGCGT TGGCGGACCG CCTTGTCGTT CCGGTGAGGG AGCTTTCCGT GGCGACGGGC ATCCCCATGC TGAGGCTTCG CAAGATCCTC AAGCGCGCCT TGAGCTGCGG ATCCATACCG CAGGGACGCC TGGAGGGCGA CGGCGTGAAC GAAACGCTGT ACCTGACCAG TGCTTCCTAC AACGCGCATC TTCAATCCCA GGCGAACATC CAGAAGGCGC AGGCCTATGA GCAGGCCCGC CGGCAGGCCG ATTCCCAAAT GCCCGACGAT GCCCAGCGCG TCGTTTCGGC GTGCCAGCGT TTCGCGATGT CCATGATGAA GGCATCGGAG CGCATCACCC ATGAGGACAC GCGCCGCCGC ATGGCCGATC TGACCGACCG CATCGCCCGC ATGTCCGAGG CCGTGCGTAG CCATCCTGAC GTGGCCCCGA AGCTGGACCG CTACGTTGAA TACTATCTAC CCACCACCGA GAAGCTTGTC AACGCCTATG CCGAGCTCGA TGCTGTCCAG GCGACGGGCG CCAATGCCGA CGCGACGCGC CAGGAGGTCG ACGAGATGCT CGACCTGCTC ACGTCCGCGA CGGATAAGCA GCTGGACGAC CTCCGCCTGG ATCAGGTATG GGACGTGTCC GGCGACGCGT ACGTAATGCG CACGATGCTG AGCCAGGACG GTTTGACGGG CCAGCGTTAA
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Protein sequence | MATYPNNSNG NSQGVISQVV STGADAVVRA TKAANRAVSS LDFDGLGATL ANAAQHAIDQ VRGYSQAPVR SPYVITPKRT GLVGGLQVAG GVVLLATAVS SLVFSLIFTQ INGVLAAMGF LSTAAFVAGG VALVSRGTDT FGLGAYIDRI AYALADRLVV PVRELSVATG IPMLRLRKIL KRALSCGSIP QGRLEGDGVN ETLYLTSASY NAHLQSQANI QKAQAYEQAR RQADSQMPDD AQRVVSACQR FAMSMMKASE RITHEDTRRR MADLTDRIAR MSEAVRSHPD VAPKLDRYVE YYLPTTEKLV NAYAELDAVQ ATGANADATR QEVDEMLDLL TSATDKQLDD LRLDQVWDVS GDAYVMRTML SQDGLTGQR
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