Gene Shel_17540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17540 
Symbol 
ID8395644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1982743 
End bp1983882 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content63% 
IMG OID644986508 
Producthypothetical protein 
Protein accessionYP_003144122 
Protein GI257064450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCT ATCCGAACAA CAGCAACGGC AATTCGCAAG GCGTTATCTC CCAGGTCGTT 
TCGACTGGGG CAGATGCCGT CGTTCGCGCG ACAAAGGCTG CCAACCGGGC CGTTTCCTCC
CTTGACTTCG ACGGGTTGGG CGCTACGCTT GCGAATGCTG CGCAGCACGC CATTGACCAG
GTCAGAGGGT ATTCGCAGGC TCCCGTCCGC TCGCCTTACG TCATCACGCC GAAGCGCACG
GGGCTGGTGG GCGGCCTTCA GGTTGCGGGC GGAGTCGTCC TGCTGGCCAC GGCCGTCAGC
TCGCTGGTGT TCTCGCTCAT CTTCACCCAG ATCAACGGCG TTCTCGCTGC CATGGGGTTT
CTTTCTACGG CCGCATTCGT GGCAGGCGGC GTTGCTCTGG TGTCCCGCGG CACCGACACC
TTCGGCCTTG GTGCCTATAT AGATAGGATT GCCTACGCGT TGGCGGACCG CCTTGTCGTT
CCGGTGAGGG AGCTTTCCGT GGCGACGGGC ATCCCCATGC TGAGGCTTCG CAAGATCCTC
AAGCGCGCCT TGAGCTGCGG ATCCATACCG CAGGGACGCC TGGAGGGCGA CGGCGTGAAC
GAAACGCTGT ACCTGACCAG TGCTTCCTAC AACGCGCATC TTCAATCCCA GGCGAACATC
CAGAAGGCGC AGGCCTATGA GCAGGCCCGC CGGCAGGCCG ATTCCCAAAT GCCCGACGAT
GCCCAGCGCG TCGTTTCGGC GTGCCAGCGT TTCGCGATGT CCATGATGAA GGCATCGGAG
CGCATCACCC ATGAGGACAC GCGCCGCCGC ATGGCCGATC TGACCGACCG CATCGCCCGC
ATGTCCGAGG CCGTGCGTAG CCATCCTGAC GTGGCCCCGA AGCTGGACCG CTACGTTGAA
TACTATCTAC CCACCACCGA GAAGCTTGTC AACGCCTATG CCGAGCTCGA TGCTGTCCAG
GCGACGGGCG CCAATGCCGA CGCGACGCGC CAGGAGGTCG ACGAGATGCT CGACCTGCTC
ACGTCCGCGA CGGATAAGCA GCTGGACGAC CTCCGCCTGG ATCAGGTATG GGACGTGTCC
GGCGACGCGT ACGTAATGCG CACGATGCTG AGCCAGGACG GTTTGACGGG CCAGCGTTAA
 
Protein sequence
MATYPNNSNG NSQGVISQVV STGADAVVRA TKAANRAVSS LDFDGLGATL ANAAQHAIDQ 
VRGYSQAPVR SPYVITPKRT GLVGGLQVAG GVVLLATAVS SLVFSLIFTQ INGVLAAMGF
LSTAAFVAGG VALVSRGTDT FGLGAYIDRI AYALADRLVV PVRELSVATG IPMLRLRKIL
KRALSCGSIP QGRLEGDGVN ETLYLTSASY NAHLQSQANI QKAQAYEQAR RQADSQMPDD
AQRVVSACQR FAMSMMKASE RITHEDTRRR MADLTDRIAR MSEAVRSHPD VAPKLDRYVE
YYLPTTEKLV NAYAELDAVQ ATGANADATR QEVDEMLDLL TSATDKQLDD LRLDQVWDVS
GDAYVMRTML SQDGLTGQR