| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17220 |
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| Symbol | |
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| ID | 8395612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1945657 |
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| End bp | 1947234 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986476 |
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| Product | predicted membrane protein involved in D-alanine export |
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| Protein accession | YP_003144090 |
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| Protein GI | 257064418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.777635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTGT ATTCGATCCA GTTCGTGGCG TTCCTCTGCG TCGCGCTGGT TGCGTATTAT
GCGCTTGGAC GGGCCAAACC TTCCTATCAG TGGACCGTAC TGCTTGCCGC CAGCATGGTG
TTCTATTATG CCACGGGGTG GCAGAACTTC TTCTTCATCC TGCTGACTGC GGCATCCACC
TGGGGTGTTG GATTGGCGTT CGGCGCCATA GAAAAACGCT CCAAGGAGGC CCGTGCGTCC
ATTAAGGATC GGAAAGAGAA GAAGGCCGTA AAAGCGAAGT ACAACCGTTA CAAATGGTAT
GTGCTGCTTG CCGCGCTCAT CCTCAACTTC GGGGTGCTCG CGTATATCAA ATATTGGAAT
GCGCTGCTGA CAGCGGTGGG GTTCGGCGAC TCGTTCTTGG CGTCCAGCCT GCTGCTGCCG
CTGGGCCTGT CGTTCTACAC GTTCCAATCG GCGAGCTACG TCATCGACAC GTACAACGCC
AAGTATGAGC CTGAGCGGAA CTTCGCCAAA TACCTGCTGT TCGTGTCCTT CTTCCCGCAG
CTGATCCAGG GCCCCATCAA CAGGTTCGAC GCGTTGGCCC ACCAGCTCTT CGAGAGCCAC
GGCTTCGACG CGGAACGCTC CAGGCGCGCG CTGGTGCTCA TCGGCTACGG CATGCTGAAG
AAGTATGTCG TCGCCGACCT GCTTGTCACC ACCATCGCGG CGTGTTTGGA CAACGTGACC
GGCGACACGC CCGGCTCCAT CATCCTGTTC GGCATCCTGC TGTATTCCGC CCAGCAGTAC
GGCGACTTCT CCGGCGGCAT CGACATGGTG CGCGGCGTGG CCATGCTTTT CGGTATCGAC
ATGGCGCAGA ACTTCCGCCA GCCGTATTTC TCCATCTCAC TGGGCGACTT CTGGCGCCGC
TGGCACATCA CCCTGGGTGC TTGGATGCGT GACTACGTGT TCTATCCCTT TGCGCTGACC
GGCGCAATGC AGAACCTAGG CAAATGGTGC GGCGCCCACC TGGGCCGCCA TTGGGGCCGT
ACGGTTCCGG CGTCCATCGC CAACATCCTG GTGTTCTTCC TGGTGGGCCT GTGGCACGGC
GCCGACGCCC ACTTCATCTG GTGGGGCCTG TACAACGGCA TCGTCATTGC GGCGGCCGAC
CTCGCCACGC CTTTGTGGGA GTTCCTTATC GCGAAGTTCC ATGTGAACGT GGAGTCCGCC
GGCTGGCATC TGTGGCGCAT CCTGCGCACC TTCATCGTGG TGAACATAGG CTGGTACTTC
GACCGCATCC TCGTGTTCGG CGACGTGCTC ACCGGGTTCT ACAACACGTT GTTCAACTTC
GCGCCCAGCG AGTTCTGGCC GGTGTTCCAG ACGTTCCATA TCCATCATGT GAAACTGTGC
CTGGTCGCAT CTGCCATCGG GTGCATCATT GTGTTCATCG TGAGCGTCCT GCGCGAGCGC
GGCGTGGACG TGACCGGTGA GCTGCTCAAG AAGCCTGTGG TCGTGCGCTA CGCCATCTAC
GCGTTCTGCA TGCTCATGGT GATCTGCTCA TTCGTTATCG CGCCTGCCGG GGGAGGGTTT
ATCTATGCGA ATTTTTAA
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| Protein sequence | MQLYSIQFVA FLCVALVAYY ALGRAKPSYQ WTVLLAASMV FYYATGWQNF FFILLTAAST
WGVGLAFGAI EKRSKEARAS IKDRKEKKAV KAKYNRYKWY VLLAALILNF GVLAYIKYWN
ALLTAVGFGD SFLASSLLLP LGLSFYTFQS ASYVIDTYNA KYEPERNFAK YLLFVSFFPQ
LIQGPINRFD ALAHQLFESH GFDAERSRRA LVLIGYGMLK KYVVADLLVT TIAACLDNVT
GDTPGSIILF GILLYSAQQY GDFSGGIDMV RGVAMLFGID MAQNFRQPYF SISLGDFWRR
WHITLGAWMR DYVFYPFALT GAMQNLGKWC GAHLGRHWGR TVPASIANIL VFFLVGLWHG
ADAHFIWWGL YNGIVIAAAD LATPLWEFLI AKFHVNVESA GWHLWRILRT FIVVNIGWYF
DRILVFGDVL TGFYNTLFNF APSEFWPVFQ TFHIHHVKLC LVASAIGCII VFIVSVLRER
GVDVTGELLK KPVVVRYAIY AFCMLMVICS FVIAPAGGGF IYANF
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