| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17030 |
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| Symbol | |
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| ID | 8395593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1919257 |
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| End bp | 1921701 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644986457 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_003144071 |
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| Protein GI | 257064399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTTA CATCGAATAT GAACAAGCAG ACGGTGGACG AGGTGCGCGA CCGCATCGCA
CGGCGGGTGC GCCGCGAATT CGGCGTGACC GTGAAGTCGG CCGCCATCCA GCAGGTATAT
CAGGCGGCGG CGCTGTGCGT CCGCGACGAC ATCATGGACG TGTGGGCCGA CGAGCGCGAA
CGCTCGAAGG GCGACGGCCG CAAGAACGTG GTCTATCTGT GTGCGGAATA CCTGATCGGC
CGTGCCTTCA CGAACAACCT CATCAACTTA GGCATGTACG AGACCTACGA GAAGGCCCTG
GAGGAGCTCG GGTTCGACAT CGGCGCCATC GAGGAGCAGG AGGCCGACGC GGGTCTGGGC
AACGGTGGCC TGGGGCGCCT GGCCGCGTGC TTTTTGGACA GCCTGTCCAC GCTGAACATA
CCTTCCATCG GCTTCGGCAT CCGCTACGAG TACGGGTTCT TCCGTCAGGA GATCCACGAC
GGCATGCAGC GCGAAATGCC CGACACCTGG TCCATCGACC GCGACGTGTG GGAAGCCGAG
CGTGCCGACC GCGTGTTCCC CGTGCAGTTC GGCGGCCAGG TCGAGGAGCA GTGGGGCGCC
GACGGCCGCC TGAAGGTGGT CTACCACAAC GCCCAGACGG TGCTGGCCGA GGCCTGCGAC
ATCCCCATCG TGGGCTACCG GAGCAAGCTT CCGGCCACCC TGCGCCTGTG GCGCGCCCAT
GCGCCCAGCT CCTTCGACCT GACCCGGTTC AACCAGGGCG ACTTCGAAGG CGCCGTGGCC
GAGCGCGAGC TGGCGGAATC CATCTCCAAG GTGCTCTATC CCGATGACAG CCACAACCAG
GGTCAGGAGC TGCGCCTGCG CCAGTTCTAC TTCCTGGTGT CGGCCACCAT GCAGTTCCTG
GTGCAGTCGC ACAAGAACCA ATACGGCGAC CTGCGCACGT TCGCCGACAA GATTGCCGTG
CAGATCAACG ACACGCATCC GGCGCTTGCC GTTCCCGAGT TCATCCGCAT CCTCATCGAC
GAGGAGGGAT TCACCTGGGA AGAGGCCGTC GACCTGGCGC AACGTACCTT CAACTACACG
AACCACACCA TCTTGCCCGA GGCGTTGGAG TGCTGGCCGG CCGAAACGAT GCAGCGTCTG
CTGCCGCGCA TCTACCGCAT CATCGAGACC ATCGACGCCC GCTTCCGCGA CCGCGTGTGG
CGCAACCATC CGGGCGACGC CGATCTGGTG GGCCGCATGG CCATCATCAA CGGCGGCAAG
GTGCGCATGG CCAATCTCTG CGTGCTGAGC TGCGGACATG TGAACGGCGT TTCCCAGCTG
CACGGCCGCA TCCTGCAATC GACGGTGTTC AGGGACTTCT ACACGGTGTA CCCCGAGCGG
TTCTGCGGCA TCACCAACGG CGTGACCCAG CGCCGCTGGC TGGGCGTTGC CAACCCGCGT
TTGCGCCGCC TGGTGGACGA CACCATCGGC GAAGGCTTCA TGACCGATTG GCGCAAGATC
TCGGAACTTG AGCCCTTTGC GGCCGACGCC TCCTTCCGAC AGGCCTACGA CCAGGTGAAG
GCCGCCAACA AGGTGGAGTT CTCCAATTGG ATGCTGAAGA GCCGCGGCGT GGAGGTCGAC
CCCGCCATGG TGATCGACGC CCAGGCCAAA CGCCTGCACG AATACAAGCG CCAGCTCATG
AAGGCGCTGC ATATCCTGGC CATCTACGAC GGCATCGTCG AGGGACGCGC CCACAAGATG
CCTCCGACCA CCTTCGTGTT CGCAGCGAAG GCTGCTCCCG GCTACAAGCG GGCAAAGGAC
ATCATCCGTC TGATCAACTC CGTGGCGAAG TTGGTCTCCT CCGACGAGCG CACCCGCGAC
TTGATCCGTG TGGTGTTCTT GGAGAATTAT GACGTGACGG CCGCCCAGCA CCTGGTGGCT
GCGGCGGACA TATCCGAGCA GATTTCCACC GCCGGCATGG AGGCTTCCGG TACCAGCAAC
ATGAAGTTCA TGCTGAACGG CGCCCTTACC CTGGGCACCA TGGACGGGGC CAACATCGAG
ATTGCCGAGC AGGTGGGGCC CAAGAACATC TTCATCTTCG GCGCGCGTGT GGAGGAGTTG
GACCGCATGA AAGCTGAGGG TTCCTACAAC CCGCGCGCGG TGGTTGAGGC GAACCCGCAT
CTGCAGCGCG TGCTGCGCCA TCTGGTGGAC GGCAGCCTGC CCACCAGCGA CGGCAGCCGG
TTCGAAGACA TCTACTACTC GCTGGCACCC GAAGGCGGGC AGGGCGACGC CTACTTCGTA
CTGCATGACT TCGCATCGTA CGACCAGGTG TTCGCGCAGG TCATGAGCGC ATACGTCGAC
CGCGACCGCT GGATTTCCAG CGCGGTGGTC AACACGGCCA AGGCGGGGTA TTTCAGCTCG
GACCGCGCCA TCGAGGATTA CGCCAACCAA ATCTGGCAGC TGTAG
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| Protein sequence | MGLTSNMNKQ TVDEVRDRIA RRVRREFGVT VKSAAIQQVY QAAALCVRDD IMDVWADERE
RSKGDGRKNV VYLCAEYLIG RAFTNNLINL GMYETYEKAL EELGFDIGAI EEQEADAGLG
NGGLGRLAAC FLDSLSTLNI PSIGFGIRYE YGFFRQEIHD GMQREMPDTW SIDRDVWEAE
RADRVFPVQF GGQVEEQWGA DGRLKVVYHN AQTVLAEACD IPIVGYRSKL PATLRLWRAH
APSSFDLTRF NQGDFEGAVA ERELAESISK VLYPDDSHNQ GQELRLRQFY FLVSATMQFL
VQSHKNQYGD LRTFADKIAV QINDTHPALA VPEFIRILID EEGFTWEEAV DLAQRTFNYT
NHTILPEALE CWPAETMQRL LPRIYRIIET IDARFRDRVW RNHPGDADLV GRMAIINGGK
VRMANLCVLS CGHVNGVSQL HGRILQSTVF RDFYTVYPER FCGITNGVTQ RRWLGVANPR
LRRLVDDTIG EGFMTDWRKI SELEPFAADA SFRQAYDQVK AANKVEFSNW MLKSRGVEVD
PAMVIDAQAK RLHEYKRQLM KALHILAIYD GIVEGRAHKM PPTTFVFAAK AAPGYKRAKD
IIRLINSVAK LVSSDERTRD LIRVVFLENY DVTAAQHLVA AADISEQIST AGMEASGTSN
MKFMLNGALT LGTMDGANIE IAEQVGPKNI FIFGARVEEL DRMKAEGSYN PRAVVEANPH
LQRVLRHLVD GSLPTSDGSR FEDIYYSLAP EGGQGDAYFV LHDFASYDQV FAQVMSAYVD
RDRWISSAVV NTAKAGYFSS DRAIEDYANQ IWQL
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