Gene Shel_16950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16950 
Symbol 
ID8395585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1905412 
End bp1906362 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content58% 
IMG OID644986449 
Producttranscriptional regulator 
Protein accessionYP_003144063 
Protein GI257064391 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG AGTATCTGCG GGAGTTCCTC GAATTGACGC GTTGCTTGAA CTATACGAAG 
ACCGCTGCGA AAGTGCACAT CACGCAGCCG ACCTTATCCA AGCACATCGT CAGCCTGGAG
AAAGAGCTGG GCTGCAAGCT TTTGGAGCGC GACAGGCGCA AGGTCATCCT GACGCCGGAA
GGAAACATTC TCGCAGCCGC AGCAACGGAA ATCGTCGAGT CGTACGATTC GGCTCAGGCC
AGGATCTCGG AAGTCCAGAG AAGCGCGCCT ATCCATGTCG GCGGCGTGCT GCATGACGCG
ACCATCTCGT CTATCGTCAG CATCGGAGCC ACGTTCATCG ACCAGGCGGG GTTGTCGCCC
GTCATCTACC ATTACAACGA TTCAAGCTCC ATCGACGACC TCATACAGGA CGAAATCGAC
ATCTCCGTCA CCAACTGCGG TACGGACGAG ATGGAGGAGA TGGGCCTTCG CTTCCTCCCC
ATGACGCGGT CCCGTTTCGT GGCGTTGGTC AGTGCGGACA ACCCGTTGGC GGGCTACTCG
AGCATCACCA TGGACCAGCT GCGCAATGCG CGGTTCATCA AGTTCGCCGA CAGATACGCT
TCGAGCGGTT GGCGCACCAT CGAGTCGGTG TGCCACAACC ATGGGATTGT GCCGAGGACC
CGCATCGTGC TCGACCACAA CGCGACGAAT TACTGCACCG TTCCTCTGGA TGACAACGAC
GTCATGATTT TGCAGGCCAA CATGCCTCAG CTTCGCTTCT TGAGCGATTT CTCCCGCGTG
GCGGTCGTGC CGATCGACGA CGACGATGCC GCGTTCCATC TCTATTGTAT ATACAAGGCC
GAAAATGAAG AACGGCTGCG GCCGGTTCTG GAAGCGTATT CCCGCGCTCG GAAGATCGTC
CTGTCCCACG GCATGAATGC CGGAGGAGGG TTGCTGGTCG GCAAAAGATG A
 
Protein sequence
MDIEYLREFL ELTRCLNYTK TAAKVHITQP TLSKHIVSLE KELGCKLLER DRRKVILTPE 
GNILAAAATE IVESYDSAQA RISEVQRSAP IHVGGVLHDA TISSIVSIGA TFIDQAGLSP
VIYHYNDSSS IDDLIQDEID ISVTNCGTDE MEEMGLRFLP MTRSRFVALV SADNPLAGYS
SITMDQLRNA RFIKFADRYA SSGWRTIESV CHNHGIVPRT RIVLDHNATN YCTVPLDDND
VMILQANMPQ LRFLSDFSRV AVVPIDDDDA AFHLYCIYKA ENEERLRPVL EAYSRARKIV
LSHGMNAGGG LLVGKR