Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16950 |
Symbol | |
ID | 8395585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1905412 |
End bp | 1906362 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986449 |
Product | transcriptional regulator |
Protein accession | YP_003144063 |
Protein GI | 257064391 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG AGTATCTGCG GGAGTTCCTC GAATTGACGC GTTGCTTGAA CTATACGAAG ACCGCTGCGA AAGTGCACAT CACGCAGCCG ACCTTATCCA AGCACATCGT CAGCCTGGAG AAAGAGCTGG GCTGCAAGCT TTTGGAGCGC GACAGGCGCA AGGTCATCCT GACGCCGGAA GGAAACATTC TCGCAGCCGC AGCAACGGAA ATCGTCGAGT CGTACGATTC GGCTCAGGCC AGGATCTCGG AAGTCCAGAG AAGCGCGCCT ATCCATGTCG GCGGCGTGCT GCATGACGCG ACCATCTCGT CTATCGTCAG CATCGGAGCC ACGTTCATCG ACCAGGCGGG GTTGTCGCCC GTCATCTACC ATTACAACGA TTCAAGCTCC ATCGACGACC TCATACAGGA CGAAATCGAC ATCTCCGTCA CCAACTGCGG TACGGACGAG ATGGAGGAGA TGGGCCTTCG CTTCCTCCCC ATGACGCGGT CCCGTTTCGT GGCGTTGGTC AGTGCGGACA ACCCGTTGGC GGGCTACTCG AGCATCACCA TGGACCAGCT GCGCAATGCG CGGTTCATCA AGTTCGCCGA CAGATACGCT TCGAGCGGTT GGCGCACCAT CGAGTCGGTG TGCCACAACC ATGGGATTGT GCCGAGGACC CGCATCGTGC TCGACCACAA CGCGACGAAT TACTGCACCG TTCCTCTGGA TGACAACGAC GTCATGATTT TGCAGGCCAA CATGCCTCAG CTTCGCTTCT TGAGCGATTT CTCCCGCGTG GCGGTCGTGC CGATCGACGA CGACGATGCC GCGTTCCATC TCTATTGTAT ATACAAGGCC GAAAATGAAG AACGGCTGCG GCCGGTTCTG GAAGCGTATT CCCGCGCTCG GAAGATCGTC CTGTCCCACG GCATGAATGC CGGAGGAGGG TTGCTGGTCG GCAAAAGATG A
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Protein sequence | MDIEYLREFL ELTRCLNYTK TAAKVHITQP TLSKHIVSLE KELGCKLLER DRRKVILTPE GNILAAAATE IVESYDSAQA RISEVQRSAP IHVGGVLHDA TISSIVSIGA TFIDQAGLSP VIYHYNDSSS IDDLIQDEID ISVTNCGTDE MEEMGLRFLP MTRSRFVALV SADNPLAGYS SITMDQLRNA RFIKFADRYA SSGWRTIESV CHNHGIVPRT RIVLDHNATN YCTVPLDDND VMILQANMPQ LRFLSDFSRV AVVPIDDDDA AFHLYCIYKA ENEERLRPVL EAYSRARKIV LSHGMNAGGG LLVGKR
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