Gene Shel_16790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16790 
Symbol 
ID8395569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1886154 
End bp1887743 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content62% 
IMG OID644986433 
Productsulfite oxidase-like oxidoreductase 
Protein accessionYP_003144047 
Protein GI257064375 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.707001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGGA AGAAGAAACT GTTCGCCTTG GGCGCCACGG CGCTTTTGGC GGGCGCGCTC 
TGCGCAGTGG GATGCGCGCA GACGGAAGCC GAGAATCCCG ACGATGCGTC GTCGGTCGTC
ATCGAGAACC CCGCCGTGTT CGTGGACGAC GACGGCGACT TGATCCAGTT GGCGCCGTTC
GACGACCGTA CGAACGCCGC ATGGTACCAG CAGGACCCGT TCAAGCAGTT CAACACGAAC
TATCTCCACG CCGATCAGCG CGGATGCAAG TCGTGCCATT CCGACCTCGC CGATTTGGTC
TGGAACTCGG AGTACTACCA TCCCGGTCGC TACGGCTTGA ACGTGGAGTG GACCGTGCAG
ACGTGCCGTG GCTGTCATAG CACGTCGGGC TACGGCATCG ACATCACCGA AGACAACAAG
TTCGGCGACA TCATGCATGC CACGCACATG AACGTGGAGA CCGAATGCTG GAGCTGCCAC
GCCACGTCGT CTTCGAACCT TATCTACGAT TCCGACACCG AGGGCACTAT GCTTCTGTGG
GAGGACGCGC GCACCGAGGA ACTGCGCGGC TTCACCGACA TCGCGTCCGA TGACATGGAC
GGTGAGTTCA CCTACAACCA GGACCTGGTC ATGGATGTCG AGGATCTTCC CAGCATCGAC
GTGCAGTTCT ACGAGTGGGA TTACAAGCGC ATCGAGAACG AAGCGAACGA CGTGCCGCTG
GACGCGCAGA TGATGAAGGA CTGGACCATC ACGATGTCCG GCAAGGTGAA GGAAGAGAAG
ACCTGGAATC TGCAGGATCT CATCGACGAC CCGAACGTCC CGAAAGAGAC CAAGGTCGTG
AAGTGGCACT GCGTGCTGAA TGCCTTCGGC GGCAATGTGA TCGGCCAGGC CGAGGTGACG
GGCATCCCGT ACTCGTGGCT CATCGAGCAG TGCGGCGGTT TGACCGAAGA CGCCAACGGC
ATCGAGAACT TCTCGGCCGA CGGTTTCAGC GACGGCGCGT CGGTTCCTCT GGAACTTGTG
ACCGACGGCA CCGCACTGGT GGTGTATGAG GTGAACGGCG AACCTCTGAC CTGGAGCGTC
GGCTATCCGT GCTTCGGCAT GGCAGGCGGC ACCGCATGCG GCAGCTGGGC CAAGCAGCTG
AGCGACATCG TGGTGACCGG CCCCGAGACC CCGTTCTTCA ACATGGTCAC CGGACGTCCG
GCAAGCGCCG ACGAGAACGA CACGCTTCAG TACAACAACC CCAACGTCGG CATCATCGGC
CTGAAGGACG GCCAGGTTGT GCAGGCCGGC GAGCCGCTGA CCATTCAGGG CTACGCCGAC
GCCTTCGACA AGGAGATCAC GGCCGTCGAG CTCTCCTTCG ACCGCGGCGC CACCTGGAAG
ACGTTCCCTG TATCCGGGAC CGACCTTGAG AAGCTGCTGA TCTGGGAGTA TACCTTCACG
CCGGACGCGG GCAGCTACTA CGTCGAGGCG CGCGCCGTCA ACAGTGACGG AAAGACCTCG
TCGCTGAACT TCAGCCGCAT GTTCACCGCC GTGGAGGACA TCGACTCGGT GAGCGCTGTG
CCGGCCGCGG ACGCCGAAGA GGAAGAATAG
 
Protein sequence
MSRKKKLFAL GATALLAGAL CAVGCAQTEA ENPDDASSVV IENPAVFVDD DGDLIQLAPF 
DDRTNAAWYQ QDPFKQFNTN YLHADQRGCK SCHSDLADLV WNSEYYHPGR YGLNVEWTVQ
TCRGCHSTSG YGIDITEDNK FGDIMHATHM NVETECWSCH ATSSSNLIYD SDTEGTMLLW
EDARTEELRG FTDIASDDMD GEFTYNQDLV MDVEDLPSID VQFYEWDYKR IENEANDVPL
DAQMMKDWTI TMSGKVKEEK TWNLQDLIDD PNVPKETKVV KWHCVLNAFG GNVIGQAEVT
GIPYSWLIEQ CGGLTEDANG IENFSADGFS DGASVPLELV TDGTALVVYE VNGEPLTWSV
GYPCFGMAGG TACGSWAKQL SDIVVTGPET PFFNMVTGRP ASADENDTLQ YNNPNVGIIG
LKDGQVVQAG EPLTIQGYAD AFDKEITAVE LSFDRGATWK TFPVSGTDLE KLLIWEYTFT
PDAGSYYVEA RAVNSDGKTS SLNFSRMFTA VEDIDSVSAV PAADAEEEE