Gene Shel_16780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16780 
Symbol 
ID8395568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1885335 
End bp1886141 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID644986432 
Productsulfite oxidase-like oxidoreductase 
Protein accessionYP_003144046 
Protein GI257064374 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.610919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAACA GGATCGGAGC CGTGGGACTG GCCGTCATGG CAGGAACCAC GTTGATGGCG 
GTGCAGGCCC TTCCCGCTGT GGCGCAAGCG GATGTGCCGG ACGAAGCGCA GGGCGGCGTT
TTGGAAACGC AGGGCTTGAA GACGATCTCC GACCAGTGCG TGAGCCTGAG CACGGTCGAA
GGCATATTCT CGTTCAACCA GGACCAGCTG TCTTCCATCG AGGAGATCCG GCTTGCATTG
GGCACCGTGC CTGAGTACCT GTGCGGTCCC CAAGGGGTCG AGGCGGCCCC CCAGCAGCTC
GGACAGGCGA GCGTCACGAA CATCCTGGTG TCGGGAAACG TGGATCAGCA GATAGCCGTG
GACCTTACCG ACACCAAGCA GAACAAGATC ACCGTGGTCA TGGGCTGCAG CTGCGCAGGC
AACCTGGCAG GCGGGCGAGG CACCGCCAAC GCCGAGATCA CCGGCGTGAA GGTGACCGAC
CTGATGGAGC AGGCGGGCGC GGCCGAAGAC GTGAACACCG TCGTCTTCAC CTCGGCCGAC
GGCTACGAGG TGGCCATGCC CCTGAGCTAT GTGACCCAGC GCCACAGCGT CATCGTGACC
GAAGTGAACG GCGAGCCCAT AGGGGAGTCC GTCGGCAGCT CGAACCAGCT ATGGCTGGGT
TCGACGTCGG CCCGCTATTT CGCGAAGGAC ATCACGAACG TCGCATTCGA GCAGCGCCAG
ACGCCTCCGC CGAACCCTTA CACCGACGAG GGCGACGAGT ATTACGGAAA CTTCCCGGGC
GTCGGCGTGT CCAGCGCGGA GGTCTAG
 
Protein sequence
MRNRIGAVGL AVMAGTTLMA VQALPAVAQA DVPDEAQGGV LETQGLKTIS DQCVSLSTVE 
GIFSFNQDQL SSIEEIRLAL GTVPEYLCGP QGVEAAPQQL GQASVTNILV SGNVDQQIAV
DLTDTKQNKI TVVMGCSCAG NLAGGRGTAN AEITGVKVTD LMEQAGAAED VNTVVFTSAD
GYEVAMPLSY VTQRHSVIVT EVNGEPIGES VGSSNQLWLG STSARYFAKD ITNVAFEQRQ
TPPPNPYTDE GDEYYGNFPG VGVSSAEV