Gene Shel_16390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16390 
Symbol 
ID8395529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1841565 
End bp1842131 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID644986393 
Producthypothetical protein 
Protein accessionYP_003144007 
Protein GI257064335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.244545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAC TCATGCTGGG AAACAGTCTG ACCACGGCGA ACCACATGCC GGACATGCTG 
GCCGAGCTCC TGACGGCCGA AGTCCGGGTG CATGCGCGGG GCGGGGCGCG CCTGGCCGAG
CATCTCAACC CGAAGACCCG CAACGGGGCC CTCACTCAGG CGGCGCTTGC AAACGAGGCC
TGGGATTTCG TGGTGATGCA GGAGATGAGC CACGGCCCTG CCACGTCGCC TACGGCCTAT
GCCCGCAGCG TGGCGTCGCT GTCGGAAGCC GCCAAGGCAG CGGGGGCGCA GCCGGTAATC
TACGGCACCT GGCCTTATCG GGCGGGATGC GCAAAGCTCG TCAAACTGGG GATGTCCCAC
GACGACATGA GCCTGCGCAT GGCCGAGGCC TTTGCTCAGG CGGCCGCCGA TTCGGGGGCG
CTTCTGGCGG ATGTCGCCGC GCCGTTTCGT GCGGGATCGG CCGATGAGCT GTATGCTGCA
GACGGCGTGC ATCCGAGTCC TGCGGGGTCG CGGCTCGCGG CGCTCGTGCT GGCAGAAACG
ATGGGGAAGG GCATTCGGCC ATGGTAG
 
Protein sequence
MRILMLGNSL TTANHMPDML AELLTAEVRV HARGGARLAE HLNPKTRNGA LTQAALANEA 
WDFVVMQEMS HGPATSPTAY ARSVASLSEA AKAAGAQPVI YGTWPYRAGC AKLVKLGMSH
DDMSLRMAEA FAQAAADSGA LLADVAAPFR AGSADELYAA DGVHPSPAGS RLAALVLAET
MGKGIRPW