| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15590 |
|---|
| Symbol | |
|---|
| ID | 8395449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1775447 |
|---|
| End bp | 1776709 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644986313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143927 |
|---|
| Protein GI | 257064255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.553711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00257031 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTCC AGGCGCGCGA CACGATTAGG CGCAACGCCG CACGGGACCG CAACGCCCGC
TACGCCCGCA TACCCGACGG CAAGGCGTGC GACTTCTGCC GCATGCTCGG AAGCCGCGGC
TTCGTGTACC ACAGCGAGGC GAGCGCGGGC GGCGACGACC AGTACCACCC GTTCTGCAAC
TGCCAGCTGG CCGTGTGCTT CGACCCGTTC GTCGAGGAGT ACTGGGTCGG CACCGTGAAG
GTGACGCGCG GCCACGGCGA CGGCGAGGTA GTGCGCGCGG GACGCGACGG CTCTATGCGC
ATGCGCGACG TCGACGTGGA CGGGCTCTAC GACGAGTACA GGCGCATGGG GCAGGACTTC
AACAAGGGCT CGCGCTACAG GGACTACTCC AAGACCGGCA GGAACGACGA CCGCGGCCGC
GGGGCGCGCC TTTCCGACGA GGAGTTCGAC GCCGCCATGA AGAGGCTCGC CGACTGCACG
TCCCTGGAGG AGCTGCACCG CGTGGGAGCC GAGATCGTGC GCGAGTGGAA GCCCAACGGG
CACGGCCGCA ACAACGCCCA GTGGGACGAG ATGAGCCGCC ACGCGCGGGA GCTCGAGAGG
CGGTTTGCAG GCTCGGGAAA CACGAGGCGT TTCGACCCAG AGTATCAACT TGAAATCTTG
CATGAGAGGG CTGACAAGAA GAGCAATCGA GCGAATCGGG GAGCTAAAGT TGATATGGAC
GCTATCGATT CGGAAGATTA TCGCGCGTTG TTTGACCGTA TAGGTAATTC GGAACTTGCT
GAGAATCTAT GTGAGAAAGC TCGCGAGTTC TTAAGGCATA GAAGTGGGAC AGTGTTCGAA
GATTTCGGCC TTTTTGGGGT CAAAGGCGGA GTTGTCTATG ACACCATCAC GACTGTCAGC
ACTCCGCATG CGGTCGAATT GACTAGAAAA TCTAAGCTGC TAATGAACAC CTCAAAGCCG
CGGTCTTTGG TTGCAATGCA CACCCATCCG GATAGCATGC CACCAAGTGC AGCAGATTTT
CTTACAAGCT TCGCTCCGTC GGTGAGATTT GGAGTAATTG CCAACCATGA TGGCTCTCTG
GTAAAATATG AGGTAGTCGA TAGAAGTAAA TTCCTGGGCA TCTTCGAAGA AGGTAAAATT
CAGGAGATTG ACGATTTGTT TGCCGACATG CTAGATGAAT ACGGCACTAG CACGGGGGAT
AGGAATATCA ACGAGATTCT CGAGAGGAGG TACGGCGTAA AGTATGAGAG ATTCAGAGTT
TAA
|
|---|
| Protein sequence | MKFQARDTIR RNAARDRNAR YARIPDGKAC DFCRMLGSRG FVYHSEASAG GDDQYHPFCN
CQLAVCFDPF VEEYWVGTVK VTRGHGDGEV VRAGRDGSMR MRDVDVDGLY DEYRRMGQDF
NKGSRYRDYS KTGRNDDRGR GARLSDEEFD AAMKRLADCT SLEELHRVGA EIVREWKPNG
HGRNNAQWDE MSRHARELER RFAGSGNTRR FDPEYQLEIL HERADKKSNR ANRGAKVDMD
AIDSEDYRAL FDRIGNSELA ENLCEKAREF LRHRSGTVFE DFGLFGVKGG VVYDTITTVS
TPHAVELTRK SKLLMNTSKP RSLVAMHTHP DSMPPSAADF LTSFAPSVRF GVIANHDGSL
VKYEVVDRSK FLGIFEEGKI QEIDDLFADM LDEYGTSTGD RNINEILERR YGVKYERFRV
|
|---|
| |