Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_15330 |
Symbol | |
ID | 8395423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1755468 |
End bp | 1756160 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644986287 |
Product | predicted amidophosphoribosyltransferase |
Protein accession | YP_003143902 |
Protein GI | 257064230 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0698628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0235577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAG AGGCTCTGCT TGAAACGCTT TGGCCTACCC GATGCGCAGG GTGCGAACGC GCGGGCAAGG TGCTTTGCGA CGACTGCATA CGGAACATGG AATACATCGA CGCCTATGCC GCCTGCCCTA TCTGCGGCGA TCCCGCCGGC CTGCGCGTCT GCACGCGTTG CAACGCCCCC GTCGAAGACC CCGAACACCG GGTCCGCACG CTCGAGTGCA GGTCGGCGGC GATGTTCACA GGGCGCATGG CGAAGGCAAT CCACGCGTAC AAGGACGCGG GCGAAACCCG CCTGTACAAG CCCTTCGCCT TGATACTTGC ACGCATCGTG CCTCCCCCGT GGCTGGACGA GGCCGATTGC GTAACCTGCG TGCCCGCATC GAAAGCGGCC ATCCGGAAAC GCGGGTTCAA CCACACCGAG CCGTTAGCGC AGCAGCTGGC GTCCAACCTC GGCCTGCCCT ACCGGCCGCT GCTTGTAGTC GGAAACGTCA AGGACCAACG TGGCTTGGGC CGCCGGCAGC GTTCGGCCAA CATGCGCCAC GTCCTGAAAG TCCTGCCCGA CACCAAACCT CCGCAGAACG TGTTGCTCAT CGACGACGTC ATGACCACTG GCGCGACGCT CGAAGCTGCC ACGACCGCCC TCAAAGATGC CGGGGCGCAA ACGGTGCGCT GCCTCACGCT TGCCAGAGCC TAA
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Protein sequence | MLKEALLETL WPTRCAGCER AGKVLCDDCI RNMEYIDAYA ACPICGDPAG LRVCTRCNAP VEDPEHRVRT LECRSAAMFT GRMAKAIHAY KDAGETRLYK PFALILARIV PPPWLDEADC VTCVPASKAA IRKRGFNHTE PLAQQLASNL GLPYRPLLVV GNVKDQRGLG RRQRSANMRH VLKVLPDTKP PQNVLLIDDV MTTGATLEAA TTALKDAGAQ TVRCLTLARA
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