Gene Shel_14760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14760 
Symbol 
ID8395366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1695649 
End bp1696131 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID644986230 
Productuniversal stress protein UspA-like protein 
Protein accessionYP_003143845 
Protein GI257064173 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0107987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA ATAACGTACT TGTTCCTTAC GACGGATCCG ATCACTCCAA GAAGGCGCTC 
TCCACCGCCG TCGAGCTGGT TGCCGCGCTT CCCGATGCCA AGCTCACGGC GCTTACGGTG
GTTCCGGCCT ACCGCGTCGA AACCGCGGGC AGCTTCCACG ACGTGGAAAC CCAGGGCGGC
GTTCCGGCCG GCATCGTCGA GTACGACCAG TACAAGCAAG CCGTCCAGCT CGTTCTTGAC
AAGGCCAAGG CCGAGCAGGT AGAAAGCATC GGCGACATCA TGGCTCCTCT GGGCGAGCGC
GCCATCGTCG ATGCCGTTGC GGAATCCTCC GTCGTCGAGG GCATCGTCGA ATACGCCGAG
AAGCACGAGG TGGACCTCAT CGTCATGGGC CGTCGCGGCC TTGGCGCCAT TCGTGCCATG
CTTGGCAGCG TGAGCTACGG CGTTCTGCAC TCCACCGACA TCTCCGTCAT GACGGTGAAG
TAA
 
Protein sequence
MAFNNVLVPY DGSDHSKKAL STAVELVAAL PDAKLTALTV VPAYRVETAG SFHDVETQGG 
VPAGIVEYDQ YKQAVQLVLD KAKAEQVESI GDIMAPLGER AIVDAVAESS VVEGIVEYAE
KHEVDLIVMG RRGLGAIRAM LGSVSYGVLH STDISVMTVK