| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14570 |
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| Symbol | |
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| ID | 8395347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1671136 |
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| End bp | 1671822 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644986211 |
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| Product | 4-diphosphocytidyl-2-methyl-D-erythritol synthase |
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| Protein accession | YP_003143826 |
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| Protein GI | 257064154 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0542271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCG GCTCCGGTAC GCGTTTCGGT GCTGACGTGC CCAAACAGTT TGTTGAAGTT
GAGGGAAAGC CCACGTTCAG CTACCTCGTG GAGAAGTATG CCGAGCTTGG TTTCGCCGAC
TACACCGTTA TCGTCTGCCA TCGCAAATGG GTCGACTTCA CGGACAAGTG GATTGCGGAC
CTTGGGCTTG AAGGCTTCGA TTACTGCGTG GTCCCAGGTG GCTCCAGCCG CTCGGAATCT
GTCAAAAACG GCTTGACCAA GGTGGCCGAA ATGGCAACCG ACGACGACAT CGTATTCATC
CACGACACCA CGCATCCTTA TGTGGATGCC GCCCATTTGG GTGACCTGTC CTCCGCTGCG
GCGAACTTCG GCGGAGCGAC CATGGCCGAA TGCCAGTACG ACACCGTGTA TGGCATGGAT
CCCGAAAGCA AGGAGCTCGT AAGCGTTATC CCACGTCAGA CCGTGGTGAC CGGCGCAAGC
CCCGAGGCTT TTAAATTCGG TCTGATCTGG CCCATCTATA AAGAGATGGA CGAGGAGCAT
CTTGAATTGT ACACGTCGGC CGGTGCTTTG GCATTGGCCC ACGACATCAA GATGAAGATC
GTTCCGACCG ACCTCATCAA CCTGAAGATT ACGTACCGCC ACGACATGGA CGCCTTCAGG
GAGCTGTTCC ATAACTACTA CTTCTAG
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| Protein sequence | MMGGSGTRFG ADVPKQFVEV EGKPTFSYLV EKYAELGFAD YTVIVCHRKW VDFTDKWIAD
LGLEGFDYCV VPGGSSRSES VKNGLTKVAE MATDDDIVFI HDTTHPYVDA AHLGDLSSAA
ANFGGATMAE CQYDTVYGMD PESKELVSVI PRQTVVTGAS PEAFKFGLIW PIYKEMDEEH
LELYTSAGAL ALAHDIKMKI VPTDLINLKI TYRHDMDAFR ELFHNYYF
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