Gene Shel_14080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14080 
Symbol 
ID8395298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1606015 
End bp1606785 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content50% 
IMG OID644986162 
ProductDNA repair photolyase 
Protein accessionYP_003143778 
Protein GI257064106 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAG GACTAGGACA TATCACGCGT AAAACCATGC TCTACCAAAC AAAGGTTGAG 
TACGGCGATT GGGCAATGAA CCACGTACAG GGATGCACTC ACGGCTGCCT ATATCCGTGT
TATGCATTCA TGATGGCGCG GCGTTTCGGG CGCGTGAAGA CTTACGAAGA CTGGCTACGC
CCTTCAATTG TCGACAATAC TATCGATTTG CTCAAGAAGG AATTACCGAA ACACAAGGAC
GAGATCAAAC AGGTTCAGCT CTGCTTCACC ACCGATCCGT TCATGATGGG ATACCCAGAT
GTTGAGCAAA TGAGCGTCGA GGCAATCAAG CTTATCAATA GCTATGGCAT ACCTTGCGTC
GTGCTTACCA AAGGCGTGCT TCCCAAATCA CTTACTGAGC TGCCAAAGAT TAATCAGTAC
GGCATCACTC TCGTTTCGCT GTCTGAGATA TTCCGTAAAG ATATGGAACC AGGAGCAGCG
TGCATCGAAG ATAGGCTTGA ATCGTTGAAG GCGCTTGGCG AAGCCGGTTG CAAGACCTGG
ATAAGCATGG AGCCATATCC AACGCCCAAC ATATGCGAAC AAGATCTCGA CATCATCCTC
GAAAGGGTCT CCTTCGTTGA CCGAATTGTT TTTGGCCGCG TGCATTACGA CAAGCGTGCG
AACGAATACG CAGACGCCAA GGCGTTCTAC AACGAATCGG CGCGAAAGGT AATCGAGTTC
TGCGCTAGTC ATGGTATCGA TTACCACATC AAGAACGGCA CGGCGGACTA G
 
Protein sequence
MDQGLGHITR KTMLYQTKVE YGDWAMNHVQ GCTHGCLYPC YAFMMARRFG RVKTYEDWLR 
PSIVDNTIDL LKKELPKHKD EIKQVQLCFT TDPFMMGYPD VEQMSVEAIK LINSYGIPCV
VLTKGVLPKS LTELPKINQY GITLVSLSEI FRKDMEPGAA CIEDRLESLK ALGEAGCKTW
ISMEPYPTPN ICEQDLDIIL ERVSFVDRIV FGRVHYDKRA NEYADAKAFY NESARKVIEF
CASHGIDYHI KNGTAD