Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14080 |
Symbol | |
ID | 8395298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1606015 |
End bp | 1606785 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644986162 |
Product | DNA repair photolyase |
Protein accession | YP_003143778 |
Protein GI | 257064106 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAG GACTAGGACA TATCACGCGT AAAACCATGC TCTACCAAAC AAAGGTTGAG TACGGCGATT GGGCAATGAA CCACGTACAG GGATGCACTC ACGGCTGCCT ATATCCGTGT TATGCATTCA TGATGGCGCG GCGTTTCGGG CGCGTGAAGA CTTACGAAGA CTGGCTACGC CCTTCAATTG TCGACAATAC TATCGATTTG CTCAAGAAGG AATTACCGAA ACACAAGGAC GAGATCAAAC AGGTTCAGCT CTGCTTCACC ACCGATCCGT TCATGATGGG ATACCCAGAT GTTGAGCAAA TGAGCGTCGA GGCAATCAAG CTTATCAATA GCTATGGCAT ACCTTGCGTC GTGCTTACCA AAGGCGTGCT TCCCAAATCA CTTACTGAGC TGCCAAAGAT TAATCAGTAC GGCATCACTC TCGTTTCGCT GTCTGAGATA TTCCGTAAAG ATATGGAACC AGGAGCAGCG TGCATCGAAG ATAGGCTTGA ATCGTTGAAG GCGCTTGGCG AAGCCGGTTG CAAGACCTGG ATAAGCATGG AGCCATATCC AACGCCCAAC ATATGCGAAC AAGATCTCGA CATCATCCTC GAAAGGGTCT CCTTCGTTGA CCGAATTGTT TTTGGCCGCG TGCATTACGA CAAGCGTGCG AACGAATACG CAGACGCCAA GGCGTTCTAC AACGAATCGG CGCGAAAGGT AATCGAGTTC TGCGCTAGTC ATGGTATCGA TTACCACATC AAGAACGGCA CGGCGGACTA G
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Protein sequence | MDQGLGHITR KTMLYQTKVE YGDWAMNHVQ GCTHGCLYPC YAFMMARRFG RVKTYEDWLR PSIVDNTIDL LKKELPKHKD EIKQVQLCFT TDPFMMGYPD VEQMSVEAIK LINSYGIPCV VLTKGVLPKS LTELPKINQY GITLVSLSEI FRKDMEPGAA CIEDRLESLK ALGEAGCKTW ISMEPYPTPN ICEQDLDIIL ERVSFVDRIV FGRVHYDKRA NEYADAKAFY NESARKVIEF CASHGIDYHI KNGTAD
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