| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13810 |
|---|
| Symbol | |
|---|
| ID | 8395271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1579898 |
|---|
| End bp | 1580797 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644986135 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003143751 |
|---|
| Protein GI | 257064079 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.289482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCG AACAATTGCG CTACTTTGCA TTGGCGTATC GGTTGGAGAG CTTTTCGGCC
GCCGCGAAAC GTATCCCCAT GTCACCCCAG GGGTTGACGA AGGCCGTTCG ATCTTTGGAG
ACGGAGCTCG GCGTTCCTTT GTTCCTAACG GCCGCAAGCG GCAAGCTTGA GCCCACTCCT
TACGCCGCAG AGCTCATGGA TTTCGTGAAC GACTACCGTA TACGGTTCGC GCAGCTCACC
AATTCCTTTG AAGCCATCCG CAAGCACGAA AGCCACGAAG TGAACGTAGG CATAGGCTTG
GGGATCTTAG GCTATCTTGG GCCCGGGTTC ATCAAGCGGT TCAACGAGCA ACACCCGGAA
ATCACCCTGC GGTATGAAGA GCTGAACGAC AAGGCTTGCG ACGAGGGTTT GAAACGGGGC
AAATACGACC TGGCGCTGTG CGTGACCCCT TTCGACCCGG ATTTCCTCTG CGAGCAGCTC
TACTGCACGA ACATGTGCTT CTGGGTCAGC AAGAGCAATC CGCTTTCGGA AAGAGACGTT
CTGACCATCA AGGATTTCGA CGGCGAAGGC GTAGCGTTGC CCGGTCAGGA CTTCAAATGC
TTCGAGTACC TGCAATCCCG CGCCGTCGAT GCCGGCGTCG AGTTCTCTGA GGTGTTCGCA
TCTGCAGAGA TCTTCCGGCT GTTCGAGTAT GCCCGCATGG GCAAGGGGCT GGGCTTCAGC
GCACAGCACC TCGTGGATAT GCCTCTGTTC AAGGAAGACG AGAGCGTCGT CGGCATTCCG
CTTGAAGGAG CCACCTGGGG GTTCGGCATT GCGTGCCAGC CTACGAACAG CTTAAACGAC
GATGCGCAGG CATTTTTCGA TTACTGCGTC GAGAACGTTC CCAAACGCGG CCAGGAGTAG
|
|---|
| Protein sequence | MNGEQLRYFA LAYRLESFSA AAKRIPMSPQ GLTKAVRSLE TELGVPLFLT AASGKLEPTP
YAAELMDFVN DYRIRFAQLT NSFEAIRKHE SHEVNVGIGL GILGYLGPGF IKRFNEQHPE
ITLRYEELND KACDEGLKRG KYDLALCVTP FDPDFLCEQL YCTNMCFWVS KSNPLSERDV
LTIKDFDGEG VALPGQDFKC FEYLQSRAVD AGVEFSEVFA SAEIFRLFEY ARMGKGLGFS
AQHLVDMPLF KEDESVVGIP LEGATWGFGI ACQPTNSLND DAQAFFDYCV ENVPKRGQE
|
|---|
| |