Gene Shel_13100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13100 
Symbol 
ID8395201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1501465 
End bp1502346 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID644986066 
Productpredicted esterase of the alpha-beta hydrolase superfamily 
Protein accessionYP_003143686 
Protein GI257064014 
COG category[R] General function prediction only 
COG ID[COG4667] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.551391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCA ACATCTTCGA CACTGCGCTT GTTTTCGAAG GCGGCGGCAT GCGTTGCAGC 
TACTCGGCCG GCTTCGTGAA CATGCTGCTC GAAAACGAAA TCTACATCAA CGACGTGTAC
GGTCTGTCCG CCGGCGCCAG CAACACCGTG AACTACCTTA CCCGTGATAA GAACCGCGTG
AAGGCATCGT TTGTCGACAT CGCTTCGTTT CCCGGTTTCT GCGGGTTCGG AAGCTTCCTT
ACCGGCAAGG GCTACTTCGA CGCCTACAAC ATCTACCAAT GCATGGGCAA ATCGGACGGC
CCACTCCCCT TCAACCTGCA GGCGTTTCTC GACAATCCGG CACATGCCAC CATCCAGTCG
TTCAACCGCG ATACCGGAGA AACCGTGTAT TGGACCAAAG ACGACATGCG CAGCCTGAAC
GACATCATGG TGCGCGTGCG GGCATCATCC ACGTTGCCTG TGGCCATGCC TTCTCCCCAA
ATCGACGGCA ACTGGTATTA CGACGGCGGC CTTGGCATCG GTGCAGGATT CATTCTGCCG
CGCGCCATCG ACGACGGCTT CAAACGGTTC GTCATCGTGC GCAGCCGCCC GAAGAGCTAC
CGTAAAACCG ACCCCGGGTT CTCGGGCAAG CTGATCAACG CCGCACTGCA CAAATACCCC
AAGGTTTGCG AGGCCCTGAA CACCCGTAAG GAGCGCTACA ACGCTTTCTG CGACCAGATT
GAACAGCTGG AAGCGGAAGG GTCCGCGTTC GTGTTCTACG CGGAAAACCA GGCCTGCGAA
TCCGGCGATT CGGACATGGC GAAGCTGGAA GCGAACTATC AGGAAGGCTA CAAGCAGGCC
TACCGCGACC TGCCTGCGCT CAAGGAGTTC TTGGGCATCT AA
 
Protein sequence
MESNIFDTAL VFEGGGMRCS YSAGFVNMLL ENEIYINDVY GLSAGASNTV NYLTRDKNRV 
KASFVDIASF PGFCGFGSFL TGKGYFDAYN IYQCMGKSDG PLPFNLQAFL DNPAHATIQS
FNRDTGETVY WTKDDMRSLN DIMVRVRASS TLPVAMPSPQ IDGNWYYDGG LGIGAGFILP
RAIDDGFKRF VIVRSRPKSY RKTDPGFSGK LINAALHKYP KVCEALNTRK ERYNAFCDQI
EQLEAEGSAF VFYAENQACE SGDSDMAKLE ANYQEGYKQA YRDLPALKEF LGI