Gene Shel_12090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12090 
Symbol 
ID8395100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1393040 
End bp1393285 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content60% 
IMG OID644985966 
Producthypothetical protein 
Protein accessionYP_003143586 
Protein GI257063914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.948048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TGATTAGATA CGAGCTGAAA AAGATCCTGG GCAACAGGCC CGGCATGGTT 
GCATGCGTGT TGGTCCTGCT CATGCTCGTG TTCGCAAACG TGCTCAACCT GGCCATGATC
CAGACGCGCG ACATCGCCAC CGGCGAGCGG ATACGCGGCG CGGCCGCCGT CGAGGCCGAC
TCAAGCCTGG CCGCAGTCTG CATCCCCCTT TCGGCTTCGG TATTCTCGAA GCACCAAGTA
AGCTAA
 
Protein sequence
MATLIRYELK KILGNRPGMV ACVLVLLMLV FANVLNLAMI QTRDIATGER IRGAAAVEAD 
SSLAAVCIPL SASVFSKHQV S