Gene Shel_11370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11370 
Symbol 
ID8395028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1296328 
End bp1297443 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID644985895 
Producthypothetical protein 
Protein accessionYP_003143521 
Protein GI257063849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AGAAGAGCGA GGCGCCCGAC GCGGCGGAGC GTGTGCAGGA ATCGGCGGAA 
CGGGCTGCCG AGCAGGGCGA GGCCGCCATG GAAGAAACCG ACGATGGTCG GGCCGCTGCG
GTGGATGAAG ACCCTGTTGA AGACGACGCT GCGGGCCTTA CCGATGAGGC CGAGGGCCAG
GTCGGCGAAC GTGCGCAGGG CGTGGGGCCA GACGGCGCAG ATGTACACCA GGCAGCCGAG
GTTTCGAAGC AGGCTCTAGA CGGATTCGAT GGCGGCGTCG GCGTGCCGGC CGAACCGCCG
AAGCCGGGTT CCGCCGAAGC GGCTGACAGC GTCTGCGGGG TGGCTGCGGC GGAAGCGTCT
GCAACGGGCC AGGTGGTGAC CTGCGGCGTC ATCCGCGACC TGCTGCCGCT GTACGTGGAC
GATGTGGTGG GAGCCGAAAC GCGGGCCATG GTAGATGCGC ACCTGCAATC CTGTGCTGGC
TGCCAGGGCT ATCTGGACGG CATGAACAGC GTGGTCCAGA TTCCTGTGGC GCCGAAGCAG
GGTTTGGAGG ACGCGAAGGT ATTGCGCGGG CTGAAGCGGT TCATCCGCAA CAAACGCCTG
CTTACAGGCT TAGGGACGGC CGTGGCGGTG CTCGTGGCAT GCTGCTTGGC CGTGGGGCTC
ATGAACTCGT ACGAGTGGGA CGTTCCCTAC AGCGAGGACA TCAACGTGTA CCAGAACGGG
GATGGTTACG TTAATCTGCA GTATACAGGT GCCGGTCATG TGATGTTTGA CAGCTACTGG
GACGAAACCG GCGTCATGAA CGTCTCGTGC CGGCAGTCGT TCTGGGACCG CTATGTGGAG
CCGATTTACG ATAACGGCAT GGACGAGTTT GCGCTGTCCG ATTCGTCCGA CATTATCGAG
GTCCGCTACT ACGACACGCC GGAAGGGATG TATGACGCGG ACGCGGCATG CGAAGTGGTT
TGGGAAGCGG ACGAACAGGC CAAACGCGAA TTCTACGAGC GCCAGCGCAA CAATGAGCAG
GCTTCGGAGG ACCTGGAAGA GCTGTATCGT CAGCAGCAGG AGATCGTGGA GCAGATTTGG
GTTCTTGAGG CCGAGCAGGA AGGCTATACC CGCTAG
 
Protein sequence
MSKKKSEAPD AAERVQESAE RAAEQGEAAM EETDDGRAAA VDEDPVEDDA AGLTDEAEGQ 
VGERAQGVGP DGADVHQAAE VSKQALDGFD GGVGVPAEPP KPGSAEAADS VCGVAAAEAS
ATGQVVTCGV IRDLLPLYVD DVVGAETRAM VDAHLQSCAG CQGYLDGMNS VVQIPVAPKQ
GLEDAKVLRG LKRFIRNKRL LTGLGTAVAV LVACCLAVGL MNSYEWDVPY SEDINVYQNG
DGYVNLQYTG AGHVMFDSYW DETGVMNVSC RQSFWDRYVE PIYDNGMDEF ALSDSSDIIE
VRYYDTPEGM YDADAACEVV WEADEQAKRE FYERQRNNEQ ASEDLEELYR QQQEIVEQIW
VLEAEQEGYT R