Gene Shel_11260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11260 
Symbol 
ID8395017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1283389 
End bp1283844 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID644985884 
Producttransposase 
Protein accessionYP_003143510 
Protein GI257063838 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACC AGCACAACAG CCTGTCGCAC ACGAAGTGGA TGTGCAAGTA CCACATCGTG 
TTCACGCCCA AGTATAGGCG AAGAATCACC TACAACCAAT ACCGGAAGGA CGTCGGGGAG
ATACTGCGCA CGCTGTGCTC CTACAAGGGC GTCGAGATCA TCGAGGGGCA CCTGATGCCC
GACCACGTGC ACATGCTGGT CAGCATCCCG CCCAAGATGA GCGTTTCGAG CTTTATGGGG
TACCTGAAGG GGAAGAGCTC GCTCGTGATG TTCGAGCGGC ACGCGAACCT CAAGTACAAG
TTCGGCAACA GGAAGTTCTG GTCGGAGGGC TACTACGTGT CGACCGTCGG GCTGAACGAG
GAGACGATCG CGAAGTACAT ACGGGACCAG GAGGCCGCCG ACCAGGCGCT TGACAGGCTG
AGCGTCAAGG AGTACGAGGA CCCGTTCGCC AGGTAG
 
Protein sequence
MAHQHNSLSH TKWMCKYHIV FTPKYRRRIT YNQYRKDVGE ILRTLCSYKG VEIIEGHLMP 
DHVHMLVSIP PKMSVSSFMG YLKGKSSLVM FERHANLKYK FGNRKFWSEG YYVSTVGLNE
ETIAKYIRDQ EAADQALDRL SVKEYEDPFA R