Gene Shel_11160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11160 
Symbol 
ID8395007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1273162 
End bp1273623 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID644985874 
Producthypothetical protein 
Protein accessionYP_003143500 
Protein GI257063828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.359613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCA TACTTGTGGA TACGAACGTC ATTCTGGATT TCATGCTGAA GCGCAACGAC 
TTCGACTCCG CGCGCTGGCT GCTCATCTTC TCGAAGATGA ATGACTACGA GCTGTGGGTG
AGCTCCTCCC AGATAGCCGA TTTGCATTAC GCCACAAGCA ACCGCGGCAA CCGACGCTAC
GCCGAGCAGG CCCGAGCCGC CCTGCTGCAT CTGCGGAAGT TCGTCAACGT GGTTTCGGTC
GGCCAGCGCG AGGTGGACCT GGCGCTCGAC TCGCAGTGGG ACGACTTCGA AGATTCCCTG
GTCCATCAGG CCGCCGTCAG CATCGGCGCG AATGTGCTCG TGACCCGCAA CCTTGCCGAT
TTCGAGCGCT CGTCGATTCC CGCCATGACG CCCGAGGCTT TCTTCACCTG GATGGAGGAA
CGACACGGCG TCTATTACGC CGAGATGATT CGCGCCCATT GA
 
Protein sequence
MIRILVDTNV ILDFMLKRND FDSARWLLIF SKMNDYELWV SSSQIADLHY ATSNRGNRRY 
AEQARAALLH LRKFVNVVSV GQREVDLALD SQWDDFEDSL VHQAAVSIGA NVLVTRNLAD
FERSSIPAMT PEAFFTWMEE RHGVYYAEMI RAH