| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10890 |
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| Symbol | |
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| ID | 8394980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1245073 |
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| End bp | 1245678 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644985847 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_003143473 |
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| Protein GI | 257063801 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.280945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000228732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCACAAA AGCCTCAACA CAACGGTTCG TTGAAACACG GCGGCGTCTT CGCGGGCGTC
GCCGTCCTTT GGCTTGTTCT GGACCGTCTG ACGAAAATCT ATTTCGAGAA CGCCTACGAG
CTGGGGCAGA CGTCTGTGCA CGATTATCTG GTCGTGCGAT TCCGACTGAT CCACAACACA
GGCGCCGCCT GGGGAATTTT CTCCGATTCC ACCTTCGCGC TGGGTTGTCT GTCGCTGGTG
GTCTGCGCCC TGGTCGTTGC TGCGTGGCTC ATGTGGGACA AAGCCATGGG GCGTCCCGCC
ACTCTGGTGG AGACGCTGGC TCTTTCGCTG GTGTTCAGCG GCGGTTTGGG AAACTGCATC
GACCGCTTCA TGCAAGGCTA CGTCATAGAT TTCCTAGATT TCACGTTCAT GGATTTCCCG
GTGTTCAACG TTGCCGACAT CGGTGTGACC TGCGGATTCG CACTGCTGGT CATCGCGTAT
CTGGTGCTGG AGCGCAATTC CGGCGCCGCC GAGGCTGAAA GCGCCGACGG AGCCGAAGAC
GCCGACACGG TCGAAGTCGC CGATGCTCCT GAAACGTCCG ACGCATCCGA AGGAGACCAG
GCATAG
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| Protein sequence | MAQKPQHNGS LKHGGVFAGV AVLWLVLDRL TKIYFENAYE LGQTSVHDYL VVRFRLIHNT
GAAWGIFSDS TFALGCLSLV VCALVVAAWL MWDKAMGRPA TLVETLALSL VFSGGLGNCI
DRFMQGYVID FLDFTFMDFP VFNVADIGVT CGFALLVIAY LVLERNSGAA EAESADGAED
ADTVEVADAP ETSDASEGDQ A
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