Gene Shel_10470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10470 
Symbol 
ID8394938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1192722 
End bp1193090 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content53% 
IMG OID644985805 
Productlactoylglutathione lyase-like lyase 
Protein accessionYP_003143431 
Protein GI257063759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000146284 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCAA GGTTCGTGCA TCGTTGCACC CATGTGCTCG ACAAAGAGGC AACGATAGCG 
TTTTACGAGA AGGCGCTCGG ATTTCGTGTC GTGCGTGAAA AGGGGCCAGA AGACGGGTCG
TGGACCAATA CCTTCATGGT GAATGACGAG TCCCCGTTTG AGCTCGAACT CACGTGGAAC
CGCGGTTATA CGGAGCCATA CGAGAACGGC GGCAAAGACA CGCATATTGC ATTCCGTGTG
GATGACTATG ACGTATACCA TGCGTTGCAT GATGAAATGG GCTGCATCGT TCGCGAGAAC
CCTCGCATGG GTCTGTATTT CATTACCGAC CCGGACGGTC AGTGGATTGA GATTCTGCCC
GAGCAATAG
 
Protein sequence
MKARFVHRCT HVLDKEATIA FYEKALGFRV VREKGPEDGS WTNTFMVNDE SPFELELTWN 
RGYTEPYENG GKDTHIAFRV DDYDVYHALH DEMGCIVREN PRMGLYFITD PDGQWIEILP
EQ