Gene Shel_10260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10260 
Symbol 
ID8394917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1170106 
End bp1171089 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID644985784 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_003143410 
Protein GI257063738 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00535946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000366409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAT CTCAAGGGCT GTTGCCGGCA TATCTCATCG TTGGTGAAGA CGAATTGAAG 
CGCAATACCG TGCTCAAGCG TCTGCGCTCG CGCGTGGCCG CGTTGGGCGA CATCGACTTC
AACTCCGACT ATTTCGAAGG TCCTAACGTG ACCGGTGAAG ACGTCGTCAC ATCCTGCAAC
ACGGTGCCTT TCGCCAGCGA CGTGCGCCTG GTGGTCGTCA AGAGCGGCGA GGGTTTGAAA
AAAGCCGCAG CCACCGCCAT CGCCGACTAT CTTAAAGAGC CCTGCACCAC CACGGTGCTT
GCCGTCGTGG CCACCAAGAT GGCCAAAAAC ACCGCGCTGT ACAAGGCTAT GGCCAAAGTG
GGGCGTCAGG CGGTCATCGA CTGCTCGCCT ATGACGAAGA AGGAGCTTCC CGATAAGGTT
CGGGGTATGG CCCTGACCCA TGGCTTCGGG ATGAATCTGG ATGCCGCCTC GCGTTTGGTG
GACCTGGTGG GCGAAAACAC CGTGCGGATC GATGCCGAGC TGCAGAAGAT TGCTTTGGCT
CATACCGGAA AGCAGCCCGT GGGCGTTTCC GAGGTGGAGG CGCTTGTGGC CCGCACGGCC
GAGGCCAAGC CTTGGGATTT CTCGGACGCC TTCGGCGCGC GCAACGTAAA CCAGATGCTT
GCGGTGTGGA ACCGTCTGGA CAGCGGGTCG GTGTTCGTCC TGCTGGGTAG ATGCGTAACC
GTGCTGCGCG AGCTTCTGAC CTGCAAGGCG CTGGCCAAGC GAGGCCAGAC CAGCCAGCAG
GCCCTGGCGG CGGCTTTGGG CAACGTGCCT ACCTGGAAGG TGAGGAACCA TCAGGCTTGG
GCGCGCCAAT GGACCGCCGA GGAGTTGCGC CACGCCCTAA GCGCAGCCCG AGACTGCGAG
CGCGCCATGA AGAGCGGATC GAACCCTGAA GACGCGTTTC TGAAATGGGT GCTCGAGACA
GCACGCCGCC GTCCTGCGCG TTAG
 
Protein sequence
MAESQGLLPA YLIVGEDELK RNTVLKRLRS RVAALGDIDF NSDYFEGPNV TGEDVVTSCN 
TVPFASDVRL VVVKSGEGLK KAAATAIADY LKEPCTTTVL AVVATKMAKN TALYKAMAKV
GRQAVIDCSP MTKKELPDKV RGMALTHGFG MNLDAASRLV DLVGENTVRI DAELQKIALA
HTGKQPVGVS EVEALVARTA EAKPWDFSDA FGARNVNQML AVWNRLDSGS VFVLLGRCVT
VLRELLTCKA LAKRGQTSQQ ALAAALGNVP TWKVRNHQAW ARQWTAEELR HALSAARDCE
RAMKSGSNPE DAFLKWVLET ARRRPAR