Gene Shel_09730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09730 
Symbol 
ID8394864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1115390 
End bp1116334 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content62% 
IMG OID644985732 
Producthypothetical protein 
Protein accessionYP_003143360 
Protein GI257063688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.953034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGT TTGACGGCTT GACGAAAGAG AAGCACTGCG CGGTCTGCGG CAAAGAAGTC 
GGCCTGTTCG GCAAGGCGAA GCTGAAGGAC GGCAACTACG TATGCGATGA CTGTTCCGCT
AAGTTCTCGC CGTTCATGAG CGGCTGGAAG GCCTATCCCA TCGAGAAGAT CAACGACCAT
CTGGCGTACC GCGAGGCAAA CGAGATGGCG TTGCAGGAAT TCGCGGCCAC CGACACGTTC
GGCGCCGCCA CCAAAGTGGT GGTGGACTCC CGCAAGGGCT GGTTCATCGT GACGAGCCGG
GACCCGTGGC GCGAGGGCAA CCCCGACATC ATCGGGTTCA ACCAGGTTGC GAACTGCTCG
TACAGCGTCT CCGAGACCAA AACCGAGATC TACAAGGTGA ACGAGCCGGG GCACCGCGAG
TCTTACGAAC CGAAACGGTA CGACACCGAT TACGACATAT TCGTCACCAT CGAGGTCGAT
TCGCCCTGGT ACAGCACCAT CCGGTTCAAG ACGAATCCGT CGCGCATCAA GGTGAAGGGC
AGCAAGGAGT GGGACGCCGC CGAAGCCGAG GCCCAACGCA TCCAGGACTT GATGATGGGC
GTGCGCAACC TGTCCCGTCA GGCCGAAATC GAAGCGCAGC TGTCGGCTCT GCGGGTCGAG
AAGGCCGCTG AGCCCGAACC TGCGAACGAG GTCGCGGCCG CGCCTGATGC AGGCGCATGG
GCGTGCTCTT GCGGGCAGCA GGGCAACACA GGCAACTTCT GCCAGAACTG CGGAAGCCCC
AAGCCCGGCC CCTCCGAGTG GACTTGCGAA TGCGGCGCGG CCAACTCCGG CAACTTCTGC
CAGAACTGCG GAAAGCCCCG TCCCGAGGCC GCATCCTGGC AGTGCGAGTG CGGGTCCGTG
AACACCTCCA AGTTCTGCGG CAATTGCGGC AAACCCCGTC CGTAG
 
Protein sequence
MGLFDGLTKE KHCAVCGKEV GLFGKAKLKD GNYVCDDCSA KFSPFMSGWK AYPIEKINDH 
LAYREANEMA LQEFAATDTF GAATKVVVDS RKGWFIVTSR DPWREGNPDI IGFNQVANCS
YSVSETKTEI YKVNEPGHRE SYEPKRYDTD YDIFVTIEVD SPWYSTIRFK TNPSRIKVKG
SKEWDAAEAE AQRIQDLMMG VRNLSRQAEI EAQLSALRVE KAAEPEPANE VAAAPDAGAW
ACSCGQQGNT GNFCQNCGSP KPGPSEWTCE CGAANSGNFC QNCGKPRPEA ASWQCECGSV
NTSKFCGNCG KPRP